RNA–Protein interactions for RNA: ENST00000417433.6

POLR1B-204, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 3,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-204ENST00000417433 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
POLR1B-204ENST00000417433 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
POLR1B-204ENST00000417433 ABCC9O60706 1549 aa14.67□□□□□ -0.06
POLR1B-204ENST00000417433 SHROOM4Q9ULL8 1493 aa14.65□□□□□ -0.06
POLR1B-204ENST00000417433 CCDC180Q9P1Z9 1646 aa14.45□□□□□ -0.1
POLR1B-204ENST00000417433 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
POLR1B-204ENST00000417433 ZCCHC6Q5VYS8 1495 aaKnown RBP14.16□□□□□ -0.14
POLR1B-204ENST00000417433 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.15
POLR1B-204ENST00000417433 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
POLR1B-204ENST00000417433 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
POLR1B-204ENST00000417433 NACADO15069 1562 aa13.81□□□□□ -0.2
POLR1B-204ENST00000417433 DCAF1Q9Y4B6 1507 aa13.78□□□□□ -0.2
POLR1B-204ENST00000417433 MYO15BQ96JP2 1530 aa13.49□□□□□ -0.25
POLR1B-204ENST00000417433 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
POLR1B-204ENST00000417433 FAM9AQ8IZU1 332 aaPredicted RBP13.34□□□□□ -0.27
POLR1B-204ENST00000417433 TRIM41Q8WV44 630 aa13.33□□□□□ -0.28
POLR1B-204ENST00000417433 CHIC1Q5VXU3 224 aa13.27□□□□□ -0.29
POLR1B-204ENST00000417433 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
POLR1B-204ENST00000417433 RSF1Q96T23 1441 aaPredicted RBP13.18□□□□□ -0.3
POLR1B-204ENST00000417433 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
POLR1B-204ENST00000417433 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
POLR1B-204ENST00000417433 RANGAP1P46060 587 aaPredicted RBP13.09□□□□□ -0.31
POLR1B-204ENST00000417433 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
POLR1B-204ENST00000417433 UBTFP17480 764 aaKnown RBP13.01□□□□□ -0.33
POLR1B-204ENST00000417433 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
POLR1B-204ENST00000417433 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
POLR1B-204ENST00000417433 BICRAQ9NZM4 1560 aa12.96□□□□□ -0.33
POLR1B-204ENST00000417433 WIZO95785 1651 aa12.95□□□□□ -0.34
POLR1B-204ENST00000417433 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
POLR1B-204ENST00000417433 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
POLR1B-204ENST00000417433 SMARCA4P51532 1647 aa12.94□□□□□ -0.34
POLR1B-204ENST00000417433 FBLN2P98095 1184 aa12.89□□□□□ -0.35
POLR1B-204ENST00000417433 APLP2Q06481 763 aa12.89□□□□□ -0.35
POLR1B-204ENST00000417433 ERCC6Q03468 1493 aa12.88□□□□□ -0.35
POLR1B-204ENST00000417433 ATP1B4Q9UN42 357 aaPredicted RBP12.88□□□□□ -0.35
POLR1B-204ENST00000417433 TTBK1Q5TCY1 1321 aaPredicted RBP12.86□□□□□ -0.35
POLR1B-204ENST00000417433 DNAJC5BQ9UF47 199 aa12.86□□□□□ -0.35
POLR1B-204ENST00000417433 LOC105371045A0A1W2PR82 267 aa12.84□□□□□ -0.35
POLR1B-204ENST00000417433 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
POLR1B-204ENST00000417433 CCDC88BA6NC98 1476 aa12.8□□□□□ -0.36
POLR1B-204ENST00000417433 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
POLR1B-204ENST00000417433 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
POLR1B-204ENST00000417433 CADPSQ9ULU8 1353 aa12.74□□□□□ -0.37
POLR1B-204ENST00000417433 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
POLR1B-204ENST00000417433 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.38
POLR1B-204ENST00000417433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
POLR1B-204ENST00000417433 HNRNPUL2Q1KMD3 747 aaKnown RBP12.68□□□□□ -0.38
POLR1B-204ENST00000417433 CSRNP3Q8WYN3 585 aa12.67□□□□□ -0.38
POLR1B-204ENST00000417433 PCGF6Q9BYE7 350 aa12.65□□□□□ -0.38
POLR1B-204ENST00000417433 HRCP23327 699 aa12.62□□□□□ -0.39
POLR1B-204ENST00000417433 PEG3Q9GZU2 1588 aa12.61□□□□□ -0.39
POLR1B-204ENST00000417433 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
POLR1B-204ENST00000417433 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
POLR1B-204ENST00000417433 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
POLR1B-204ENST00000417433 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
POLR1B-204ENST00000417433 FANCD2Q9BXW9 1451 aa12.58□□□□□ -0.4
POLR1B-204ENST00000417433 NESP48681 1621 aa12.56□□□□□ -0.4
POLR1B-204ENST00000417433 PPARGC1BQ86YN6 1023 aaKnown RBP12.55□□□□□ -0.4
POLR1B-204ENST00000417433 P3H3Q8IVL6 736 aa12.55□□□□□ -0.4
POLR1B-204ENST00000417433 KIF27Q86VH2 1401 aa12.5□□□□□ -0.41
POLR1B-204ENST00000417433 TDRD9Q8NDG6 1382 aaKnown RBP12.49□□□□□ -0.41
POLR1B-204ENST00000417433 SOGA1O94964 1423 aa12.49□□□□□ -0.41
POLR1B-204ENST00000417433 CUX2O14529 1486 aa12.48□□□□□ -0.41
POLR1B-204ENST00000417433 ARID3CA6NKF2 412 aa12.47□□□□□ -0.41
POLR1B-204ENST00000417433 CFTRP13569 1480 aa12.46□□□□□ -0.41
POLR1B-204ENST00000417433 TRIM26Q12899 539 aaPredicted RBP12.46□□□□□ -0.41
POLR1B-204ENST00000417433 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
POLR1B-204ENST00000417433 EEA1Q15075 1411 aa12.4□□□□□ -0.43
POLR1B-204ENST00000417433 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
POLR1B-204ENST00000417433 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
POLR1B-204ENST00000417433 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
POLR1B-204ENST00000417433 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
POLR1B-204ENST00000417433 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
POLR1B-204ENST00000417433 ITGAEP38570 1179 aa12.34□□□□□ -0.43
POLR1B-204ENST00000417433 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
POLR1B-204ENST00000417433 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
POLR1B-204ENST00000417433 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
POLR1B-204ENST00000417433 GOLGA3Q08378 1498 aa12.29□□□□□ -0.44
POLR1B-204ENST00000417433 TOPBP1Q92547 1522 aa12.27□□□□□ -0.45
POLR1B-204ENST00000417433 CEP162Q5TB80 1403 aa12.26□□□□□ -0.45
POLR1B-204ENST00000417433 CDK11AQ9UQ88 783 aaPredicted RBP12.26□□□□□ -0.45
POLR1B-204ENST00000417433 AQRO60306 1485 aaKnown RBP eCLIP12.26□□□□□ -0.452e-6■■■■■ 31.8
POLR1B-204ENST00000417433 CLIP1P30622 1438 aa12.24□□□□□ -0.45
POLR1B-204ENST00000417433 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
POLR1B-204ENST00000417433 GAPVD1Q14C86 1478 aa12.23□□□□□ -0.45
POLR1B-204ENST00000417433 TOP2BQ02880 1626 aa12.23□□□□□ -0.45
POLR1B-204ENST00000417433 FAM50AQ14320 339 aaKnown RBP12.22□□□□□ -0.45
POLR1B-204ENST00000417433 KIF21BO75037 1637 aa12.22□□□□□ -0.45
POLR1B-204ENST00000417433 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
POLR1B-204ENST00000417433 POLA1P09884 1462 aaPredicted RBP12.22□□□□□ -0.45
POLR1B-204ENST00000417433 CUX1P39880 1505 aa12.2□□□□□ -0.46
POLR1B-204ENST00000417433 OSCARQ8IYS5 282 aa12.2□□□□□ -0.46
POLR1B-204ENST00000417433 DNMBPQ6XZF7 1577 aa12.19□□□□□ -0.46
POLR1B-204ENST00000417433 IFT140Q96RY7 1462 aa12.19□□□□□ -0.46
POLR1B-204ENST00000417433 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
POLR1B-204ENST00000417433 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
POLR1B-204ENST00000417433 RAPGEF2Q9Y4G8 1499 aa12.16□□□□□ -0.46
POLR1B-204ENST00000417433 KCNH8Q96L42 1107 aa12.15□□□□□ -0.46
POLR1B-204ENST00000417433 IGF1RP08069 1367 aa12.15□□□□□ -0.46
POLR1B-204ENST00000417433 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms