Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC01558Q9Y6Z2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC01558Q9Y6Z2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 GNAS-203ENST00000306120 1878 ntBASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC01558Q9Y6Z2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 ECEL1P2-201ENST00000461596 1295 ntBASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC01558Q9Y6Z2 AC135776.1-201ENST00000319817 2481 ntBASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC01558Q9Y6Z2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms