Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 AC090192.1-201ENST00000517740 490 ntBASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 MYC-209ENST00000641252 345 ntBASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA11Q9Y5H2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA11Q9Y5H2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PCDHGA11Q9Y5H2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA11Q9Y5H2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA11Q9Y5H2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHGA11Q9Y5H2 AP000974.1-201ENST00000623909 2387 ntBASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 AL138781.1-201ENST00000566567 1274 ntBASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 HLA-B-256ENST00000639848 1089 ntBASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA11Q9Y5H2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 AC133041.1-202ENST00000642053 222 ntBASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 AC116351.2-201ENST00000606540 1585 ntBASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 TREX1-205ENST00000625293 1783 ntBASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19■□□□□ 0.63
PCDHGA11Q9Y5H2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 AC018553.1-201ENST00000616682 1458 ntBASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA11Q9Y5H2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms