Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 NOC2LP2-201ENST00000407594 1944 ntBASIC16.66■□□□□ 0.26
GPN1Q9HCN4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GPN1Q9HCN4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 MIR4787-201ENST00000607364 84 ntBASIC16.65■□□□□ 0.26
GPN1Q9HCN4 MIR6724-1-201ENST00000616420 92 ntBASIC16.65■□□□□ 0.26
GPN1Q9HCN4 MIR6724-2-201ENST00000616483 92 ntBASIC16.65■□□□□ 0.26
GPN1Q9HCN4 MIR6724-4-201ENST00000617390 92 ntBASIC16.65■□□□□ 0.26
GPN1Q9HCN4 MIR6724-3-201ENST00000622482 92 ntBASIC16.65■□□□□ 0.26
GPN1Q9HCN4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.65■□□□□ 0.26
GPN1Q9HCN4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GPN1Q9HCN4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
GPN1Q9HCN4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.64■□□□□ 0.26
GPN1Q9HCN4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
GPN1Q9HCN4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 TSPY9P-201ENST00000440215 945 ntBASIC16.64■□□□□ 0.25
GPN1Q9HCN4 TSPY11P-201ENST00000442607 1045 ntBASIC16.64■□□□□ 0.25
GPN1Q9HCN4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GPN1Q9HCN4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 AC053503.5-201ENST00000601508 636 ntBASIC16.63■□□□□ 0.25
GPN1Q9HCN4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 AC116050.2-201ENST00000612102 1779 ntBASIC16.63■□□□□ 0.25
GPN1Q9HCN4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GPN1Q9HCN4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GPN1Q9HCN4 KRT8P36-201ENST00000489121 1440 ntBASIC16.62■□□□□ 0.25
GPN1Q9HCN4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPN1Q9HCN4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GPN1Q9HCN4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms