Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC5Q8IY18 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SMC5Q8IY18 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SMC5Q8IY18 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
SMC5Q8IY18 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24.33■■□□□ 1.49
SMC5Q8IY18 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
SMC5Q8IY18 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.32■■□□□ 1.48
SMC5Q8IY18 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC5Q8IY18 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
SMC5Q8IY18 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
SMC5Q8IY18 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC5Q8IY18 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SMC5Q8IY18 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC5Q8IY18 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.32■■□□□ 1.48
SMC5Q8IY18 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.32■■□□□ 1.48
SMC5Q8IY18 AC142086.2-201ENST00000569753 217 ntBASIC24.32■■□□□ 1.48
SMC5Q8IY18 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC5Q8IY18 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SMC5Q8IY18 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC5Q8IY18 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SMC5Q8IY18 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC24.32■■□□□ 1.48
SMC5Q8IY18 TNXA-203ENST00000507684 2038 ntBASIC24.32■■□□□ 1.48
SMC5Q8IY18 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.32■■□□□ 1.48
SMC5Q8IY18 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SMC5Q8IY18 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMC5Q8IY18 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMC5Q8IY18 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMC5Q8IY18 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SMC5Q8IY18 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMC5Q8IY18 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMC5Q8IY18 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SMC5Q8IY18 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.31■■□□□ 1.48
SMC5Q8IY18 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC24.31■■□□□ 1.48
SMC5Q8IY18 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.31■■□□□ 1.48
SMC5Q8IY18 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.31■■□□□ 1.48
SMC5Q8IY18 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SMC5Q8IY18 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SMC5Q8IY18 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMC5Q8IY18 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24.3■■□□□ 1.48
SMC5Q8IY18 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SMC5Q8IY18 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMC5Q8IY18 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMC5Q8IY18 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMC5Q8IY18 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.3■■□□□ 1.48
SMC5Q8IY18 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC24.3■■□□□ 1.48
SMC5Q8IY18 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.3■■□□□ 1.48
SMC5Q8IY18 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.3■■□□□ 1.48
SMC5Q8IY18 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.3■■□□□ 1.48
SMC5Q8IY18 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.3■■□□□ 1.48
SMC5Q8IY18 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMC5Q8IY18 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SMC5Q8IY18 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC24.3■■□□□ 1.48
SMC5Q8IY18 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.29■■□□□ 1.48
SMC5Q8IY18 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.29■■□□□ 1.48
SMC5Q8IY18 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
SMC5Q8IY18 AC092666.2-201ENST00000613287 246 ntBASIC24.29■■□□□ 1.48
SMC5Q8IY18 AL109923.1-201ENST00000618799 583 ntBASIC24.29■■□□□ 1.48
SMC5Q8IY18 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SMC5Q8IY18 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
SMC5Q8IY18 AL020996.1-203ENST00000536896 2307 ntBASIC24.29■■□□□ 1.48
SMC5Q8IY18 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SMC5Q8IY18 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC24.28■■□□□ 1.48
SMC5Q8IY18 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.28■■□□□ 1.48
SMC5Q8IY18 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 AC069152.1-201ENST00000438030 544 ntBASIC24.28■■□□□ 1.48
SMC5Q8IY18 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC24.28■■□□□ 1.48
SMC5Q8IY18 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.28■■□□□ 1.48
SMC5Q8IY18 AC104771.1-201ENST00000603335 964 ntBASIC24.28■■□□□ 1.48
SMC5Q8IY18 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SMC5Q8IY18 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SMC5Q8IY18 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
SMC5Q8IY18 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC24.28■■□□□ 1.48
SMC5Q8IY18 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.28■■□□□ 1.48
SMC5Q8IY18 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SMC5Q8IY18 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SMC5Q8IY18 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SMC5Q8IY18 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms