Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.57■□□□□ 0.88
CBX1P83916 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX1P83916 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.57■□□□□ 0.88
CBX1P83916 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CBX1P83916 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CBX1P83916 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CBX1P83916 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CBX1P83916 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CBX1P83916 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CBX1P83916 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CBX1P83916 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CBX1P83916 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CBX1P83916 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CBX1P83916 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX1P83916 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.56■□□□□ 0.88
CBX1P83916 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX1P83916 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX1P83916 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CBX1P83916 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX1P83916 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX1P83916 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.56■□□□□ 0.88
CBX1P83916 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CBX1P83916 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX1P83916 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.56■□□□□ 0.88
CBX1P83916 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.56■□□□□ 0.88
CBX1P83916 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX1P83916 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CBX1P83916 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CBX1P83916 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.56■□□□□ 0.88
CBX1P83916 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.55■□□□□ 0.88
CBX1P83916 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 BX005040.4-201ENST00000637145 1518 ntBASIC20.55■□□□□ 0.88
CBX1P83916 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.55■□□□□ 0.88
CBX1P83916 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.55■□□□□ 0.88
CBX1P83916 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CBX1P83916 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.55■□□□□ 0.88
CBX1P83916 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CBX1P83916 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.55■□□□□ 0.88
CBX1P83916 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CBX1P83916 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.54■□□□□ 0.88
CBX1P83916 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.54■□□□□ 0.88
CBX1P83916 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.54■□□□□ 0.88
CBX1P83916 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CBX1P83916 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CBX1P83916 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.54■□□□□ 0.88
CBX1P83916 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX1P83916 BCL2-203ENST00000589955 5011 ntBASIC20.53■□□□□ 0.88
CBX1P83916 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX1P83916 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.53■□□□□ 0.88
CBX1P83916 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX1P83916 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX1P83916 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX1P83916 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
CBX1P83916 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.53■□□□□ 0.88
CBX1P83916 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.53■□□□□ 0.88
CBX1P83916 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX1P83916 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CBX1P83916 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX1P83916 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CBX1P83916 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX1P83916 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX1P83916 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CBX1P83916 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX1P83916 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CBX1P83916 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.52■□□□□ 0.88
CBX1P83916 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX1P83916 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX1P83916 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CBX1P83916 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.52■□□□□ 0.88
CBX1P83916 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX1P83916 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CBX1P83916 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.52■□□□□ 0.88
CBX1P83916 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms