Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HMGA2P52926 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HMGA2P52926 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGA2P52926 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGA2P52926 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
HMGA2P52926 AL355472.2-201ENST00000422958 438 ntBASIC17.92■□□□□ 0.46
HMGA2P52926 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGA2P52926 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 AC069236.1-201ENST00000604339 616 ntBASIC17.92■□□□□ 0.46
HMGA2P52926 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HMGA2P52926 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HMGA2P52926 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HMGA2P52926 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.92■□□□□ 0.46
HMGA2P52926 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGA2P52926 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGA2P52926 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGA2P52926 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HMGA2P52926 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
HMGA2P52926 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGA2P52926 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMGA2P52926 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMGA2P52926 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGA2P52926 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGA2P52926 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.91■□□□□ 0.46
HMGA2P52926 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.91■□□□□ 0.46
HMGA2P52926 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
HMGA2P52926 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGA2P52926 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGA2P52926 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGA2P52926 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGA2P52926 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGA2P52926 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGA2P52926 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMGA2P52926 TEX21P-204ENST00000641479 1693 ntBASIC17.9■□□□□ 0.46
HMGA2P52926 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGA2P52926 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGA2P52926 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGA2P52926 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGA2P52926 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGA2P52926 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGA2P52926 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGA2P52926 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.9■□□□□ 0.46
HMGA2P52926 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HMGA2P52926 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGA2P52926 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGA2P52926 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGA2P52926 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGA2P52926 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGA2P52926 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGA2P52926 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMGA2P52926 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGA2P52926 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGA2P52926 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGA2P52926 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGA2P52926 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HMGA2P52926 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGA2P52926 AC010980.2-201ENST00000587099 1412 ntBASIC17.89■□□□□ 0.46
HMGA2P52926 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGA2P52926 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HMGA2P52926 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGA2P52926 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGA2P52926 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HMGA2P52926 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGA2P52926 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGA2P52926 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HMGA2P52926 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGA2P52926 TFP1-202ENST00000475455 1573 ntBASIC17.89■□□□□ 0.45
HMGA2P52926 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
HMGA2P52926 AC137761.2-201ENST00000561729 223 ntBASIC17.89■□□□□ 0.45
HMGA2P52926 AC145350.3-201ENST00000569033 163 ntBASIC17.89■□□□□ 0.45
HMGA2P52926 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.89■□□□□ 0.45
HMGA2P52926 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.89■□□□□ 0.45
HMGA2P52926 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGA2P52926 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGA2P52926 OR10C1-204ENST00000622521 1039 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms