Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
NR4A1P22736 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NR4A1P22736 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
NR4A1P22736 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR4A1P22736 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NR4A1P22736 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.17■□□□□ 0.5
NR4A1P22736 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR4A1P22736 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.17■□□□□ 0.5
NR4A1P22736 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NR4A1P22736 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NR4A1P22736 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.16■□□□□ 0.5
NR4A1P22736 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.16■□□□□ 0.5
NR4A1P22736 SLC7A5P1-201ENST00000568957 537 ntBASIC18.16■□□□□ 0.5
NR4A1P22736 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.16■□□□□ 0.5
NR4A1P22736 AC080038.1-201ENST00000611274 1154 ntBASIC18.16■□□□□ 0.5
NR4A1P22736 AC011767.1-201ENST00000617410 1153 ntBASIC18.16■□□□□ 0.5
NR4A1P22736 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 MYCNOS-205ENST00000641950 531 ntBASIC18.16■□□□□ 0.5
NR4A1P22736 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NR4A1P22736 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.16■□□□□ 0.5
NR4A1P22736 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NR4A1P22736 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR4A1P22736 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.16■□□□□ 0.5
NR4A1P22736 AC104581.1-202ENST00000635932 2618 ntBASIC18.16■□□□□ 0.5
NR4A1P22736 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.15■□□□□ 0.5
NR4A1P22736 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 AC106820.2-201ENST00000563775 3264 ntBASIC18.15■□□□□ 0.5
NR4A1P22736 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.15■□□□□ 0.5
NR4A1P22736 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NR4A1P22736 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NR4A1P22736 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.15■□□□□ 0.5
NR4A1P22736 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.15■□□□□ 0.5
NR4A1P22736 SLC7A5P2-201ENST00000553010 536 ntBASIC18.15■□□□□ 0.5
NR4A1P22736 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.15■□□□□ 0.5
NR4A1P22736 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.15■□□□□ 0.5
NR4A1P22736 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 RARRES2P11-201ENST00000635158 484 ntBASIC18.15■□□□□ 0.5
NR4A1P22736 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.15■□□□□ 0.5
NR4A1P22736 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR4A1P22736 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NR4A1P22736 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NR4A1P22736 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.14■□□□□ 0.49
NR4A1P22736 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.14■□□□□ 0.49
NR4A1P22736 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 MFSD11-216ENST00000590393 1141 ntBASIC18.14■□□□□ 0.49
NR4A1P22736 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
NR4A1P22736 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NR4A1P22736 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NR4A1P22736 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NR4A1P22736 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
NR4A1P22736 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NR4A1P22736 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
NR4A1P22736 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NR4A1P22736 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.13■□□□□ 0.49
NR4A1P22736 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NR4A1P22736 AL133373.2-201ENST00000623187 2828 ntBASIC18.13■□□□□ 0.49
NR4A1P22736 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.13■□□□□ 0.49
NR4A1P22736 KRT16P2-201ENST00000414673 1423 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms