Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NFKB1P19838 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.97■□□□□ 0.79
NFKB1P19838 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.97■□□□□ 0.79
NFKB1P19838 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.97■□□□□ 0.79
NFKB1P19838 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.97■□□□□ 0.79
NFKB1P19838 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NFKB1P19838 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.97■□□□□ 0.79
NFKB1P19838 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NFKB1P19838 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NFKB1P19838 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
NFKB1P19838 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NFKB1P19838 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NFKB1P19838 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.96■□□□□ 0.79
NFKB1P19838 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.96■□□□□ 0.79
NFKB1P19838 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.96■□□□□ 0.79
NFKB1P19838 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.96■□□□□ 0.79
NFKB1P19838 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NFKB1P19838 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.95■□□□□ 0.78
NFKB1P19838 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NFKB1P19838 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NFKB1P19838 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 AC093484.2-201ENST00000580996 2166 ntBASIC19.95■□□□□ 0.78
NFKB1P19838 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.95■□□□□ 0.78
NFKB1P19838 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.95■□□□□ 0.78
NFKB1P19838 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
NFKB1P19838 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.95■□□□□ 0.78
NFKB1P19838 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.95■□□□□ 0.78
NFKB1P19838 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.95■□□□□ 0.78
NFKB1P19838 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.95■□□□□ 0.78
NFKB1P19838 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 AC007952.6-201ENST00000573168 2673 ntBASIC19.95■□□□□ 0.78
NFKB1P19838 AC003957.1-201ENST00000625108 2673 ntBASIC19.95■□□□□ 0.78
NFKB1P19838 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NFKB1P19838 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NFKB1P19838 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
NFKB1P19838 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NFKB1P19838 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NFKB1P19838 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NFKB1P19838 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
NFKB1P19838 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NFKB1P19838 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.94■□□□□ 0.78
NFKB1P19838 AC008403.3-201ENST00000598924 454 ntBASIC19.94■□□□□ 0.78
NFKB1P19838 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NFKB1P19838 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
NFKB1P19838 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NFKB1P19838 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.94■□□□□ 0.78
NFKB1P19838 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.94■□□□□ 0.78
NFKB1P19838 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.94■□□□□ 0.78
NFKB1P19838 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
NFKB1P19838 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
NFKB1P19838 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKB1P19838 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NFKB1P19838 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NFKB1P19838 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NFKB1P19838 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKB1P19838 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
NFKB1P19838 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NFKB1P19838 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
NFKB1P19838 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.93■□□□□ 0.78
NFKB1P19838 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.93■□□□□ 0.78
NFKB1P19838 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
NFKB1P19838 KRT18P6-201ENST00000555540 1265 ntBASIC19.93■□□□□ 0.78
NFKB1P19838 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.93■□□□□ 0.78
NFKB1P19838 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NFKB1P19838 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NFKB1P19838 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms