Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.2■□□□□ 0.34
UBCP0CG48 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 AC006015.1-201ENST00000429970 570 ntBASIC17.2■□□□□ 0.34
UBCP0CG48 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.2■□□□□ 0.34
UBCP0CG48 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.2■□□□□ 0.34
UBCP0CG48 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
UBCP0CG48 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.2■□□□□ 0.34
UBCP0CG48 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.2■□□□□ 0.34
UBCP0CG48 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.2■□□□□ 0.34
UBCP0CG48 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.2■□□□□ 0.34
UBCP0CG48 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.2■□□□□ 0.34
UBCP0CG48 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
UBCP0CG48 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 AC004408.2-201ENST00000623613 2777 ntBASIC17.19■□□□□ 0.34
UBCP0CG48 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.19■□□□□ 0.34
UBCP0CG48 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
UBCP0CG48 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UBCP0CG48 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.19■□□□□ 0.34
UBCP0CG48 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.19■□□□□ 0.34
UBCP0CG48 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.19■□□□□ 0.34
UBCP0CG48 C2orf69P4-201ENST00000565394 541 ntBASIC17.19■□□□□ 0.34
UBCP0CG48 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.19■□□□□ 0.34
UBCP0CG48 OR10C1-204ENST00000622521 1039 ntBASIC17.19■□□□□ 0.34
UBCP0CG48 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
UBCP0CG48 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UBCP0CG48 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBCP0CG48 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
UBCP0CG48 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.18■□□□□ 0.34
UBCP0CG48 BID-214ENST00000617586 542 ntTSL 5 BASIC17.18■□□□□ 0.34
UBCP0CG48 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.18■□□□□ 0.34
UBCP0CG48 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.18■□□□□ 0.34
UBCP0CG48 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBCP0CG48 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.17■□□□□ 0.34
UBCP0CG48 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UBCP0CG48 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.17■□□□□ 0.34
UBCP0CG48 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.17■□□□□ 0.34
UBCP0CG48 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
UBCP0CG48 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.17■□□□□ 0.34
UBCP0CG48 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.17■□□□□ 0.34
UBCP0CG48 AL355472.2-201ENST00000422958 438 ntBASIC17.17■□□□□ 0.34
UBCP0CG48 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBCP0CG48 AC007322.1-201ENST00000426983 750 ntBASIC17.17■□□□□ 0.34
UBCP0CG48 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.17■□□□□ 0.34
UBCP0CG48 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.17■□□□□ 0.34
UBCP0CG48 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UBCP0CG48 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.17■□□□□ 0.34
UBCP0CG48 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBCP0CG48 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.17■□□□□ 0.34
UBCP0CG48 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms