Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDRT1O95170 AC009113.1-201ENST00000570267 2443 ntBASIC17.48■□□□□ 0.39
CDRT1O95170 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CDRT1O95170 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDRT1O95170 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.48■□□□□ 0.39
CDRT1O95170 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDRT1O95170 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDRT1O95170 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDRT1O95170 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.48■□□□□ 0.39
CDRT1O95170 AC079598.2-202ENST00000546624 1451 ntBASIC17.48■□□□□ 0.39
CDRT1O95170 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.48■□□□□ 0.39
CDRT1O95170 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.48■□□□□ 0.39
CDRT1O95170 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDRT1O95170 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CDRT1O95170 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.47■□□□□ 0.39
CDRT1O95170 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
CDRT1O95170 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.47■□□□□ 0.39
CDRT1O95170 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.47■□□□□ 0.39
CDRT1O95170 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.47■□□□□ 0.39
CDRT1O95170 AL390961.4-201ENST00000623958 2535 ntBASIC17.47■□□□□ 0.39
CDRT1O95170 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDRT1O95170 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDRT1O95170 AC010141.2-201ENST00000452426 721 ntBASIC17.47■□□□□ 0.39
CDRT1O95170 AC105265.2-201ENST00000467189 838 ntBASIC17.47■□□□□ 0.39
CDRT1O95170 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.47■□□□□ 0.39
CDRT1O95170 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.47■□□□□ 0.39
CDRT1O95170 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.47■□□□□ 0.39
CDRT1O95170 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDRT1O95170 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.47■□□□□ 0.39
CDRT1O95170 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.46■□□□□ 0.39
CDRT1O95170 SLC7A5P2-201ENST00000553010 536 ntBASIC17.46■□□□□ 0.39
CDRT1O95170 AC104187.1-201ENST00000607510 612 ntBASIC17.46■□□□□ 0.39
CDRT1O95170 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.46■□□□□ 0.39
CDRT1O95170 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDRT1O95170 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.46■□□□□ 0.39
CDRT1O95170 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDRT1O95170 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CDRT1O95170 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDRT1O95170 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.45■□□□□ 0.38
CDRT1O95170 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.45■□□□□ 0.38
CDRT1O95170 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDRT1O95170 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.45■□□□□ 0.38
CDRT1O95170 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.45■□□□□ 0.38
CDRT1O95170 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 AC005837.3-201ENST00000612163 286 ntBASIC17.45■□□□□ 0.38
CDRT1O95170 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.45■□□□□ 0.38
CDRT1O95170 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDRT1O95170 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms