Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCP110O43303 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CCP110O43303 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCP110O43303 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCP110O43303 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCP110O43303 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
CCP110O43303 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.56■■□□□ 1.04
CCP110O43303 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCP110O43303 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCP110O43303 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCP110O43303 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCP110O43303 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
CCP110O43303 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCP110O43303 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCP110O43303 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCP110O43303 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.55■■□□□ 1.04
CCP110O43303 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.55■■□□□ 1.04
CCP110O43303 AC006015.1-201ENST00000429970 570 ntBASIC21.55■■□□□ 1.04
CCP110O43303 KRT18P11-201ENST00000435214 1283 ntBASIC21.55■■□□□ 1.04
CCP110O43303 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CCP110O43303 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCP110O43303 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
CCP110O43303 AC010536.3-201ENST00000620306 533 ntBASIC21.55■■□□□ 1.04
CCP110O43303 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.55■■□□□ 1.04
CCP110O43303 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCP110O43303 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCP110O43303 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCP110O43303 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.55■■□□□ 1.04
CCP110O43303 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
CCP110O43303 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.55■■□□□ 1.04
CCP110O43303 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCP110O43303 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CCP110O43303 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCP110O43303 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.55■■□□□ 1.04
CCP110O43303 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCP110O43303 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CCP110O43303 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 MFSD11-216ENST00000590393 1141 ntBASIC21.54■■□□□ 1.04
CCP110O43303 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 AC020763.4-201ENST00000623414 4170 ntBASIC21.54■■□□□ 1.04
CCP110O43303 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.54■■□□□ 1.04
CCP110O43303 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCP110O43303 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
CCP110O43303 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCP110O43303 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.53■■□□□ 1.04
CCP110O43303 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.53■■□□□ 1.04
CCP110O43303 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.53■■□□□ 1.04
CCP110O43303 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CCP110O43303 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCP110O43303 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.53■■□□□ 1.04
CCP110O43303 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCP110O43303 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.53■■□□□ 1.04
CCP110O43303 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.53■■□□□ 1.04
CCP110O43303 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCP110O43303 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCP110O43303 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCP110O43303 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCP110O43303 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.52■■□□□ 1.04
CCP110O43303 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCP110O43303 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCP110O43303 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCP110O43303 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCP110O43303 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCP110O43303 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCP110O43303 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.52■■□□□ 1.04
CCP110O43303 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCP110O43303 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCP110O43303 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCP110O43303 TERF1P5-201ENST00000477545 1207 ntBASIC21.52■■□□□ 1.04
CCP110O43303 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.52■■□□□ 1.04
CCP110O43303 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.52■■□□□ 1.04
CCP110O43303 FAM21FP-204ENST00000608637 956 ntBASIC21.52■■□□□ 1.04
CCP110O43303 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCP110O43303 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.52■■□□□ 1.04
CCP110O43303 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.52■■□□□ 1.04
CCP110O43303 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCP110O43303 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CCP110O43303 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms