Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF103-CHMP3A0A140T963 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC006015.1-201ENST00000429970 570 ntBASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC011767.1-201ENST00000617410 1153 ntBASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC026471.1-201ENST00000564629 3026 ntBASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
RNF103-CHMP3A0A140T963 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC068338.2-201ENST00000563278 1430 ntBASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 TMEM179-206ENST00000616017 1645 ntBASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF103-CHMP3A0A140T963 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 AL691432.2-201ENST00000607222 2038 ntBASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 NEFHP1-201ENST00000412845 2629 ntBASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF103-CHMP3A0A140T963 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms