Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 CYP2D8P-201ENST00000433633 1490 ntBASIC20.05■□□□□ 0.8
EBF1Q9UH73 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EBF1Q9UH73 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EBF1Q9UH73 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EBF1Q9UH73 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
EBF1Q9UH73 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
EBF1Q9UH73 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.04■□□□□ 0.8
EBF1Q9UH73 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EBF1Q9UH73 TERF1P1-201ENST00000311003 1181 ntBASIC20.04■□□□□ 0.8
EBF1Q9UH73 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.04■□□□□ 0.8
EBF1Q9UH73 AL137013.1-201ENST00000432946 1228 ntBASIC20.04■□□□□ 0.8
EBF1Q9UH73 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.04■□□□□ 0.8
EBF1Q9UH73 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.04■□□□□ 0.8
EBF1Q9UH73 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.04■□□□□ 0.8
EBF1Q9UH73 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EBF1Q9UH73 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EBF1Q9UH73 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.04■□□□□ 0.8
EBF1Q9UH73 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EBF1Q9UH73 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.03■□□□□ 0.8
EBF1Q9UH73 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EBF1Q9UH73 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EBF1Q9UH73 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.03■□□□□ 0.8
EBF1Q9UH73 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.03■□□□□ 0.8
EBF1Q9UH73 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.03■□□□□ 0.8
EBF1Q9UH73 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EBF1Q9UH73 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.03■□□□□ 0.8
EBF1Q9UH73 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.03■□□□□ 0.8
EBF1Q9UH73 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EBF1Q9UH73 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EBF1Q9UH73 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.03■□□□□ 0.8
EBF1Q9UH73 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EBF1Q9UH73 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EBF1Q9UH73 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.02■□□□□ 0.8
EBF1Q9UH73 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
EBF1Q9UH73 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EBF1Q9UH73 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.01■□□□□ 0.79
EBF1Q9UH73 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.01■□□□□ 0.79
EBF1Q9UH73 AL390955.1-201ENST00000428694 934 ntBASIC20.01■□□□□ 0.79
EBF1Q9UH73 SLC25A3P1-201ENST00000443844 931 ntBASIC20.01■□□□□ 0.79
EBF1Q9UH73 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.01■□□□□ 0.79
EBF1Q9UH73 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.01■□□□□ 0.79
EBF1Q9UH73 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.01■□□□□ 0.79
EBF1Q9UH73 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EBF1Q9UH73 PLK5-205ENST00000642079 1969 ntBASIC20.01■□□□□ 0.79
EBF1Q9UH73 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.01■□□□□ 0.79
EBF1Q9UH73 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.01■□□□□ 0.79
EBF1Q9UH73 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EBF1Q9UH73 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EBF1Q9UH73 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EBF1Q9UH73 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EBF1Q9UH73 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
EBF1Q9UH73 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
EBF1Q9UH73 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EBF1Q9UH73 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20■□□□□ 0.79
EBF1Q9UH73 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20■□□□□ 0.79
EBF1Q9UH73 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20■□□□□ 0.79
EBF1Q9UH73 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
EBF1Q9UH73 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EBF1Q9UH73 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
EBF1Q9UH73 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20■□□□□ 0.79
EBF1Q9UH73 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
EBF1Q9UH73 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
EBF1Q9UH73 KRT18P57-201ENST00000443599 1254 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms