Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 AC005052.1-201ENST00000625181 2492 ntBASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 AL662844.4-201ENST00000606367 2838 ntBASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 EFTUD1P1-204ENST00000560401 1798 ntBASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC10.14□□□□□ -0.79
CDC42SE1Q9NRR8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 AC026471.6-201ENST00000622954 1905 ntBASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 AC104564.3-201ENST00000582367 638 ntBASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
CDC42SE1Q9NRR8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms