Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF25Q96BH1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 AC093484.2-201ENST00000580996 2166 ntBASIC20.63■□□□□ 0.89
RNF25Q96BH1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RNF25Q96BH1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF25Q96BH1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
RNF25Q96BH1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF25Q96BH1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RNF25Q96BH1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF25Q96BH1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF25Q96BH1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF25Q96BH1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF25Q96BH1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 GPX1P1-201ENST00000388829 606 ntBASIC20.62■□□□□ 0.89
RNF25Q96BH1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RNF25Q96BH1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF25Q96BH1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF25Q96BH1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF25Q96BH1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF25Q96BH1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF25Q96BH1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 PHGDH-210ENST00000641115 1638 ntBASIC20.61■□□□□ 0.89
RNF25Q96BH1 AP001271.2-201ENST00000624018 1556 ntBASIC20.61■□□□□ 0.89
RNF25Q96BH1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RNF25Q96BH1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.61■□□□□ 0.89
RNF25Q96BH1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF25Q96BH1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF25Q96BH1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF25Q96BH1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF25Q96BH1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF25Q96BH1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF25Q96BH1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF25Q96BH1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF25Q96BH1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
RNF25Q96BH1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF25Q96BH1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF25Q96BH1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF25Q96BH1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF25Q96BH1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF25Q96BH1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF25Q96BH1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF25Q96BH1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF25Q96BH1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF25Q96BH1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.59■□□□□ 0.89
RNF25Q96BH1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 MTND2P7-201ENST00000521337 640 ntBASIC20.59■□□□□ 0.89
RNF25Q96BH1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.59■□□□□ 0.89
RNF25Q96BH1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms