Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC105Q8IYK2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC105Q8IYK2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC105Q8IYK2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 KRT18P68-201ENST00000392293 1000 ntBASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC105Q8IYK2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
CCDC105Q8IYK2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC105Q8IYK2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC105Q8IYK2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CCDC105Q8IYK2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC105Q8IYK2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC105Q8IYK2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC105Q8IYK2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC105Q8IYK2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 KRT18P35-201ENST00000510488 1269 ntBASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 SMG8-203ENST00000578922 2178 ntBASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 AC116050.2-201ENST00000612102 1779 ntBASIC21.13■□□□□ 0.97
CCDC105Q8IYK2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 TSPY15P-201ENST00000457163 923 ntBASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC105Q8IYK2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC105Q8IYK2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms