Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VRK2Q86Y07 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 SLC29A4P1-201ENST00000398760 971 ntBASIC18.17■□□□□ 0.5
VRK2Q86Y07 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 NCF1B-203ENST00000435988 1254 ntBASIC18.17■□□□□ 0.5
VRK2Q86Y07 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.17■□□□□ 0.5
VRK2Q86Y07 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 AC091874.3-201ENST00000512672 1195 ntBASIC18.17■□□□□ 0.5
VRK2Q86Y07 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 AC092118.2-201ENST00000613495 667 ntBASIC18.17■□□□□ 0.5
VRK2Q86Y07 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
VRK2Q86Y07 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 AC116351.2-201ENST00000606540 1585 ntBASIC18.17■□□□□ 0.5
VRK2Q86Y07 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VRK2Q86Y07 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 AL390719.1-204ENST00000412397 1219 ntBASIC18.16■□□□□ 0.5
VRK2Q86Y07 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 TSPY6P-201ENST00000448518 926 ntBASIC18.16■□□□□ 0.5
VRK2Q86Y07 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 AC005829.2-201ENST00000571422 1056 ntBASIC18.16■□□□□ 0.5
VRK2Q86Y07 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VRK2Q86Y07 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VRK2Q86Y07 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 AC006557.6-201ENST00000623071 864 ntBASIC18.15■□□□□ 0.5
VRK2Q86Y07 Z82202.1-201ENST00000623446 1880 ntBASIC18.15■□□□□ 0.5
VRK2Q86Y07 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK2Q86Y07 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK2Q86Y07 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
VRK2Q86Y07 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.14■□□□□ 0.5
VRK2Q86Y07 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VRK2Q86Y07 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.14■□□□□ 0.49
VRK2Q86Y07 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.14■□□□□ 0.49
VRK2Q86Y07 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.14■□□□□ 0.49
VRK2Q86Y07 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.14■□□□□ 0.49
VRK2Q86Y07 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms