Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.33■□□□□ 0.69
LRRTM4Q86VH4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRTM4Q86VH4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 AC012618.2-201ENST00000428058 849 ntBASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 TUBB8P6-201ENST00000436895 1288 ntBASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 KRT18P16-201ENST00000510337 1294 ntBASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRTM4Q86VH4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 RPS2P55-201ENST00000397318 883 ntBASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 AL353807.1-201ENST00000427475 662 ntBASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 AC107956.1-201ENST00000494359 873 ntBASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 Z99916.2-201ENST00000604037 246 ntBASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRTM4Q86VH4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 TMEM179-206ENST00000616017 1645 ntBASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 AC233702.5-201ENST00000584107 538 ntBASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 AP001412.1-201ENST00000608405 714 ntBASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRTM4Q86VH4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LRRTM4Q86VH4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRTM4Q86VH4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRTM4Q86VH4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms