Protein–RNA interactions for Protein: Q86TD4

SRL, Sarcalumenin, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRLQ86TD4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.72■□□□□ 0.91
SRLQ86TD4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.72■□□□□ 0.91
SRLQ86TD4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 KRT18P68-201ENST00000392293 1000 ntBASIC20.72■□□□□ 0.91
SRLQ86TD4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.72■□□□□ 0.91
SRLQ86TD4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.72■□□□□ 0.91
SRLQ86TD4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.72■□□□□ 0.91
SRLQ86TD4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.72■□□□□ 0.91
SRLQ86TD4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SRLQ86TD4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.72■□□□□ 0.91
SRLQ86TD4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.72■□□□□ 0.91
SRLQ86TD4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRLQ86TD4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
SRLQ86TD4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 AC087633.2-202ENST00000565166 1439 ntBASIC20.71■□□□□ 0.91
SRLQ86TD4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.71■□□□□ 0.91
SRLQ86TD4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 AL355802.2-201ENST00000402069 882 ntBASIC20.71■□□□□ 0.91
SRLQ86TD4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.71■□□□□ 0.91
SRLQ86TD4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SRLQ86TD4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.71■□□□□ 0.91
SRLQ86TD4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SRLQ86TD4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.71■□□□□ 0.91
SRLQ86TD4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.71■□□□□ 0.91
SRLQ86TD4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SRLQ86TD4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRLQ86TD4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRLQ86TD4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRLQ86TD4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRLQ86TD4 KRT17P1-201ENST00000399211 1546 ntBASIC20.7■□□□□ 0.9
SRLQ86TD4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.7■□□□□ 0.9
SRLQ86TD4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.7■□□□□ 0.9
SRLQ86TD4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SRLQ86TD4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.7■□□□□ 0.9
SRLQ86TD4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.7■□□□□ 0.9
SRLQ86TD4 LSM12P1-201ENST00000411836 588 ntBASIC20.7■□□□□ 0.9
SRLQ86TD4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.7■□□□□ 0.9
SRLQ86TD4 AC142086.2-201ENST00000569753 217 ntBASIC20.7■□□□□ 0.9
SRLQ86TD4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.7■□□□□ 0.9
SRLQ86TD4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.7■□□□□ 0.9
SRLQ86TD4 MIR2861-201ENST00000636310 90 ntBASIC20.7■□□□□ 0.9
SRLQ86TD4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRLQ86TD4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.7■□□□□ 0.9
SRLQ86TD4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRLQ86TD4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SRLQ86TD4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SRLQ86TD4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRLQ86TD4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRLQ86TD4 PCDHB18P-201ENST00000524813 2368 ntBASIC20.7■□□□□ 0.9
SRLQ86TD4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRLQ86TD4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SRLQ86TD4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.69■□□□□ 0.9
SRLQ86TD4 AP000997.3-201ENST00000623333 2250 ntBASIC20.69■□□□□ 0.9
SRLQ86TD4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SRLQ86TD4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.69■□□□□ 0.9
SRLQ86TD4 PGM5P4-201ENST00000421970 445 ntBASIC20.69■□□□□ 0.9
SRLQ86TD4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.69■□□□□ 0.9
SRLQ86TD4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.69■□□□□ 0.9
SRLQ86TD4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.69■□□□□ 0.9
SRLQ86TD4 MIR4758-201ENST00000577688 71 ntBASIC20.69■□□□□ 0.9
SRLQ86TD4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.69■□□□□ 0.9
SRLQ86TD4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.69■□□□□ 0.9
SRLQ86TD4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SRLQ86TD4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SRLQ86TD4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.69■□□□□ 0.9
SRLQ86TD4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.69■□□□□ 0.9
SRLQ86TD4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.69■□□□□ 0.9
SRLQ86TD4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.69■□□□□ 0.9
SRLQ86TD4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SRLQ86TD4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRLQ86TD4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRLQ86TD4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms