Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
KDM3BQ7LBC6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 AP005242.2-201ENST00000580065 1175 ntBASIC25.21■■□□□ 1.63
KDM3BQ7LBC6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
KDM3BQ7LBC6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.2■■□□□ 1.63
KDM3BQ7LBC6 AC096733.2-201ENST00000609937 1394 ntBASIC25.2■■□□□ 1.63
KDM3BQ7LBC6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 AC113347.1-201ENST00000413321 391 ntBASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3BQ7LBC6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 C2orf69P3-201ENST00000565542 1120 ntBASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3BQ7LBC6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 AL157384.1-201ENST00000445995 2473 ntBASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 AC131212.4-201ENST00000623606 975 ntBASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.18■■□□□ 1.62
KDM3BQ7LBC6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
KDM3BQ7LBC6 AL391422.3-201ENST00000603791 2761 ntBASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms