Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSR1Q2NL82 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.52■■□□□ 1.04
TSR1Q2NL82 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSR1Q2NL82 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSR1Q2NL82 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.52■■□□□ 1.04
TSR1Q2NL82 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.52■■□□□ 1.04
TSR1Q2NL82 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSR1Q2NL82 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.52■■□□□ 1.04
TSR1Q2NL82 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSR1Q2NL82 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TSR1Q2NL82 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.52■■□□□ 1.03
TSR1Q2NL82 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
TSR1Q2NL82 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSR1Q2NL82 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSR1Q2NL82 AC004408.2-201ENST00000623613 2777 ntBASIC21.51■■□□□ 1.03
TSR1Q2NL82 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TSR1Q2NL82 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TSR1Q2NL82 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TSR1Q2NL82 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TSR1Q2NL82 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
TSR1Q2NL82 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.51■■□□□ 1.03
TSR1Q2NL82 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TSR1Q2NL82 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.51■■□□□ 1.03
TSR1Q2NL82 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TSR1Q2NL82 AL162412.1-201ENST00000567129 965 ntBASIC21.51■■□□□ 1.03
TSR1Q2NL82 AC010536.3-201ENST00000620306 533 ntBASIC21.51■■□□□ 1.03
TSR1Q2NL82 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSR1Q2NL82 KRT8P20-201ENST00000423953 1409 ntBASIC21.51■■□□□ 1.03
TSR1Q2NL82 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.51■■□□□ 1.03
TSR1Q2NL82 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.51■■□□□ 1.03
TSR1Q2NL82 AP001271.2-201ENST00000624018 1556 ntBASIC21.51■■□□□ 1.03
TSR1Q2NL82 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TSR1Q2NL82 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
TSR1Q2NL82 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TSR1Q2NL82 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSR1Q2NL82 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.5■■□□□ 1.03
TSR1Q2NL82 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.5■■□□□ 1.03
TSR1Q2NL82 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TSR1Q2NL82 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.5■■□□□ 1.03
TSR1Q2NL82 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.5■■□□□ 1.03
TSR1Q2NL82 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TSR1Q2NL82 AL031963.3-201ENST00000606441 850 ntBASIC21.5■■□□□ 1.03
TSR1Q2NL82 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.5■■□□□ 1.03
TSR1Q2NL82 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TSR1Q2NL82 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.5■■□□□ 1.03
TSR1Q2NL82 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSR1Q2NL82 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TSR1Q2NL82 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.49■■□□□ 1.03
TSR1Q2NL82 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.49■■□□□ 1.03
TSR1Q2NL82 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.49■■□□□ 1.03
TSR1Q2NL82 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.49■■□□□ 1.03
TSR1Q2NL82 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.49■■□□□ 1.03
TSR1Q2NL82 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 AC079416.2-201ENST00000625035 1193 ntBASIC21.49■■□□□ 1.03
TSR1Q2NL82 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.49■■□□□ 1.03
TSR1Q2NL82 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSR1Q2NL82 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 PTBP1P-201ENST00000554374 1601 ntBASIC21.48■■□□□ 1.03
TSR1Q2NL82 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSR1Q2NL82 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSR1Q2NL82 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TSR1Q2NL82 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSR1Q2NL82 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSR1Q2NL82 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms