Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.97□□□□□ -0.17
UBE2D3P61077 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBE2D3P61077 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UBE2D3P61077 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2D3P61077 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.97□□□□□ -0.17
UBE2D3P61077 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.97□□□□□ -0.17
UBE2D3P61077 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2D3P61077 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.97□□□□□ -0.17
UBE2D3P61077 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2D3P61077 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2D3P61077 RARRES2P6-201ENST00000567333 442 ntBASIC13.97□□□□□ -0.17
UBE2D3P61077 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.97□□□□□ -0.17
UBE2D3P61077 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.97□□□□□ -0.17
UBE2D3P61077 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.97□□□□□ -0.17
UBE2D3P61077 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
UBE2D3P61077 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBE2D3P61077 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2D3P61077 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
UBE2D3P61077 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D3P61077 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D3P61077 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.96□□□□□ -0.17
UBE2D3P61077 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.96□□□□□ -0.17
UBE2D3P61077 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D3P61077 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D3P61077 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D3P61077 HLA-G-202ENST00000376815 851 ntBASIC13.96□□□□□ -0.17
UBE2D3P61077 HLA-G-203ENST00000376818 1127 ntBASIC13.96□□□□□ -0.17
UBE2D3P61077 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.96□□□□□ -0.17
UBE2D3P61077 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D3P61077 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.96□□□□□ -0.17
UBE2D3P61077 AC007322.1-201ENST00000426983 750 ntBASIC13.96□□□□□ -0.17
UBE2D3P61077 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D3P61077 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.96□□□□□ -0.17
UBE2D3P61077 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D3P61077 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UBE2D3P61077 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
UBE2D3P61077 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2D3P61077 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.18
UBE2D3P61077 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2D3P61077 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2D3P61077 TREX1-205ENST00000625293 1783 ntBASIC13.96□□□□□ -0.18
UBE2D3P61077 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2D3P61077 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2D3P61077 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2D3P61077 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D3P61077 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D3P61077 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.95□□□□□ -0.18
UBE2D3P61077 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
UBE2D3P61077 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D3P61077 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.95□□□□□ -0.18
UBE2D3P61077 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D3P61077 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.95□□□□□ -0.18
UBE2D3P61077 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.95□□□□□ -0.18
UBE2D3P61077 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.95□□□□□ -0.18
UBE2D3P61077 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.95□□□□□ -0.18
UBE2D3P61077 AL589743.5-201ENST00000616611 1050 ntBASIC13.95□□□□□ -0.18
UBE2D3P61077 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D3P61077 OR10C1-204ENST00000622521 1039 ntBASIC13.95□□□□□ -0.18
UBE2D3P61077 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D3P61077 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
UBE2D3P61077 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D3P61077 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D3P61077 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D3P61077 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UBE2D3P61077 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms