Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.03■■□□□ 1.12
TPM3P06753 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.03■■□□□ 1.12
TPM3P06753 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
TPM3P06753 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.03■■□□□ 1.12
TPM3P06753 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.03■■□□□ 1.12
TPM3P06753 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TPM3P06753 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.03■■□□□ 1.12
TPM3P06753 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.03■■□□□ 1.12
TPM3P06753 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.03■■□□□ 1.12
TPM3P06753 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.03■■□□□ 1.12
TPM3P06753 SLC7A5P1-201ENST00000568957 537 ntBASIC22.03■■□□□ 1.12
TPM3P06753 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TPM3P06753 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.03■■□□□ 1.12
TPM3P06753 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TPM3P06753 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TPM3P06753 AC007613.1-201ENST00000572811 2597 ntBASIC22.02■■□□□ 1.12
TPM3P06753 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TPM3P06753 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TPM3P06753 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TPM3P06753 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
TPM3P06753 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TPM3P06753 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TPM3P06753 AC027612.3-201ENST00000413684 1047 ntBASIC22.02■■□□□ 1.12
TPM3P06753 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
TPM3P06753 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.02■■□□□ 1.12
TPM3P06753 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.02■■□□□ 1.12
TPM3P06753 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
TPM3P06753 AR-207ENST00000612010 3896 ntTSL 5 BASIC22.02■■□□□ 1.12
TPM3P06753 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TPM3P06753 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.02■■□□□ 1.12
TPM3P06753 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
TPM3P06753 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
TPM3P06753 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.02■■□□□ 1.11
TPM3P06753 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.11
TPM3P06753 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.01■■□□□ 1.11
TPM3P06753 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.01■■□□□ 1.11
TPM3P06753 SUDS3P1-201ENST00000505831 966 ntBASIC22.01■■□□□ 1.11
TPM3P06753 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.01■■□□□ 1.11
TPM3P06753 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TPM3P06753 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
TPM3P06753 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TPM3P06753 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TPM3P06753 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TPM3P06753 CROCCP3-202ENST00000420820 1947 ntBASIC22■■□□□ 1.11
TPM3P06753 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
TPM3P06753 AC009237.14-201ENST00000609975 1594 ntBASIC22■■□□□ 1.11
TPM3P06753 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TPM3P06753 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TPM3P06753 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
TPM3P06753 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22■■□□□ 1.11
TPM3P06753 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
TPM3P06753 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22■■□□□ 1.11
TPM3P06753 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
TPM3P06753 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TPM3P06753 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22■■□□□ 1.11
TPM3P06753 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22■■□□□ 1.11
TPM3P06753 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TPM3P06753 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.99■■□□□ 1.11
TPM3P06753 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TPM3P06753 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
TPM3P06753 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TPM3P06753 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TPM3P06753 BCL2-203ENST00000589955 5011 ntBASIC21.99■■□□□ 1.11
TPM3P06753 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.99■■□□□ 1.11
TPM3P06753 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TPM3P06753 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.99■■□□□ 1.11
TPM3P06753 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TPM3P06753 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TPM3P06753 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TPM3P06753 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TPM3P06753 AC020916.1-201ENST00000587762 1774 ntBASIC21.99■■□□□ 1.11
TPM3P06753 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
TPM3P06753 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms