Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.65■□□□□ 0.42
HLA-DPB1P04440 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 AL137784.2-201ENST00000607332 1000 ntBASIC17.65■□□□□ 0.42
HLA-DPB1P04440 AC092666.2-201ENST00000613287 246 ntBASIC17.65■□□□□ 0.42
HLA-DPB1P04440 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HLA-DPB1P04440 LINC01465-201ENST00000408887 1940 ntBASIC17.64■□□□□ 0.42
HLA-DPB1P04440 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HLA-DPB1P04440 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 AC091799.1-201ENST00000422823 811 ntBASIC17.64■□□□□ 0.41
HLA-DPB1P04440 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 AC243732.1-201ENST00000612648 864 ntBASIC17.64■□□□□ 0.41
HLA-DPB1P04440 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HLA-DPB1P04440 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 DUX4L16-201ENST00000555130 1264 ntBASIC17.63■□□□□ 0.41
HLA-DPB1P04440 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HLA-DPB1P04440 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HLA-DPB1P04440 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms