Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3DO95025 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3DO95025 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3DO95025 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SEMA3DO95025 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.84■□□□□ 0.61
SEMA3DO95025 PNMA6B-201ENST00000538162 1200 ntBASIC18.84■□□□□ 0.61
SEMA3DO95025 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.84■□□□□ 0.61
SEMA3DO95025 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.84■□□□□ 0.61
SEMA3DO95025 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.84■□□□□ 0.61
SEMA3DO95025 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3DO95025 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3DO95025 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA3DO95025 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA3DO95025 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3DO95025 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3DO95025 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEMA3DO95025 TREX1-205ENST00000625293 1783 ntBASIC18.83■□□□□ 0.61
SEMA3DO95025 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.83■□□□□ 0.61
SEMA3DO95025 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEMA3DO95025 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.83■□□□□ 0.61
SEMA3DO95025 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEMA3DO95025 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.83■□□□□ 0.61
SEMA3DO95025 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.83■□□□□ 0.61
SEMA3DO95025 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.83■□□□□ 0.6
SEMA3DO95025 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3DO95025 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3DO95025 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.83■□□□□ 0.6
SEMA3DO95025 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
SEMA3DO95025 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA3DO95025 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.83■□□□□ 0.6
SEMA3DO95025 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
SEMA3DO95025 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.83■□□□□ 0.6
SEMA3DO95025 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.83■□□□□ 0.6
SEMA3DO95025 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SEMA3DO95025 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SEMA3DO95025 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SEMA3DO95025 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.82■□□□□ 0.6
SEMA3DO95025 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA3DO95025 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
SEMA3DO95025 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.82■□□□□ 0.6
SEMA3DO95025 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SEMA3DO95025 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.82■□□□□ 0.6
SEMA3DO95025 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.82■□□□□ 0.6
SEMA3DO95025 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.82■□□□□ 0.6
SEMA3DO95025 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.82■□□□□ 0.6
SEMA3DO95025 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEMA3DO95025 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.82■□□□□ 0.6
SEMA3DO95025 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA3DO95025 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SEMA3DO95025 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA3DO95025 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA3DO95025 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA3DO95025 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 HLA-L-209ENST00000420110 1011 ntBASIC18.81■□□□□ 0.6
SEMA3DO95025 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.81■□□□□ 0.6
SEMA3DO95025 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA3DO95025 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.81■□□□□ 0.6
SEMA3DO95025 AC006557.6-201ENST00000623071 864 ntBASIC18.81■□□□□ 0.6
SEMA3DO95025 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA3DO95025 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA3DO95025 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SEMA3DO95025 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
SEMA3DO95025 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3DO95025 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA3DO95025 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA3DO95025 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3DO95025 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3DO95025 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3DO95025 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3DO95025 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.8■□□□□ 0.6
SEMA3DO95025 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3DO95025 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3DO95025 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SEMA3DO95025 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms