Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ACTN4O43707 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ACTN4O43707 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ACTN4O43707 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.07■■□□□ 1.12
ACTN4O43707 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ACTN4O43707 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ACTN4O43707 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ACTN4O43707 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ACTN4O43707 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ACTN4O43707 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ACTN4O43707 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
ACTN4O43707 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
ACTN4O43707 AL032819.2-201ENST00000624543 2162 ntBASIC22.06■■□□□ 1.12
ACTN4O43707 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.06■■□□□ 1.12
ACTN4O43707 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.06■■□□□ 1.12
ACTN4O43707 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ACTN4O43707 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ACTN4O43707 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.06■■□□□ 1.12
ACTN4O43707 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.06■■□□□ 1.12
ACTN4O43707 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
ACTN4O43707 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ACTN4O43707 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
ACTN4O43707 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.06■■□□□ 1.12
ACTN4O43707 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.06■■□□□ 1.12
ACTN4O43707 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.06■■□□□ 1.12
ACTN4O43707 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.06■■□□□ 1.12
ACTN4O43707 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
ACTN4O43707 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ACTN4O43707 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ACTN4O43707 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.06■■□□□ 1.12
ACTN4O43707 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.06■■□□□ 1.12
ACTN4O43707 AP000974.1-201ENST00000623909 2387 ntBASIC22.05■■□□□ 1.12
ACTN4O43707 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
ACTN4O43707 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ACTN4O43707 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
ACTN4O43707 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
ACTN4O43707 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.05■■□□□ 1.12
ACTN4O43707 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.05■■□□□ 1.12
ACTN4O43707 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ACTN4O43707 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
ACTN4O43707 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.05■■□□□ 1.12
ACTN4O43707 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.05■■□□□ 1.12
ACTN4O43707 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ACTN4O43707 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
ACTN4O43707 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.05■■□□□ 1.12
ACTN4O43707 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.05■■□□□ 1.12
ACTN4O43707 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.05■■□□□ 1.12
ACTN4O43707 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.05■■□□□ 1.12
ACTN4O43707 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.05■■□□□ 1.12
ACTN4O43707 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.05■■□□□ 1.12
ACTN4O43707 MYC-209ENST00000641252 345 ntBASIC22.05■■□□□ 1.12
ACTN4O43707 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ACTN4O43707 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ACTN4O43707 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
ACTN4O43707 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ACTN4O43707 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.05■■□□□ 1.12
ACTN4O43707 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.04■■□□□ 1.12
ACTN4O43707 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.04■■□□□ 1.12
ACTN4O43707 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
ACTN4O43707 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.04■■□□□ 1.12
ACTN4O43707 AC124283.5-201ENST00000624661 1809 ntBASIC22.04■■□□□ 1.12
ACTN4O43707 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.04■■□□□ 1.12
ACTN4O43707 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.04■■□□□ 1.12
ACTN4O43707 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.04■■□□□ 1.12
ACTN4O43707 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.04■■□□□ 1.12
ACTN4O43707 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.04■■□□□ 1.12
ACTN4O43707 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.04■■□□□ 1.12
ACTN4O43707 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
ACTN4O43707 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.04■■□□□ 1.12
ACTN4O43707 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ACTN4O43707 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
ACTN4O43707 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ACTN4O43707 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ACTN4O43707 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ACTN4O43707 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.03■■□□□ 1.12
ACTN4O43707 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ACTN4O43707 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ACTN4O43707 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ACTN4O43707 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ACTN4O43707 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.03■■□□□ 1.12
ACTN4O43707 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
ACTN4O43707 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.03■■□□□ 1.12
ACTN4O43707 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ACTN4O43707 AC098934.4-201ENST00000564127 592 ntBASIC22.03■■□□□ 1.12
ACTN4O43707 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.03■■□□□ 1.12
ACTN4O43707 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.03■■□□□ 1.12
ACTN4O43707 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ACTN4O43707 AC006557.6-201ENST00000623071 864 ntBASIC22.03■■□□□ 1.12
ACTN4O43707 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms