Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 PHGDH-210ENST00000641115 1638 ntBASIC17.38■□□□□ 0.37
CCL21O00585 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL21O00585 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL21O00585 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL21O00585 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL21O00585 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCL21O00585 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 AL117328.2-201ENST00000624617 1940 ntBASIC17.37■□□□□ 0.37
CCL21O00585 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.37■□□□□ 0.37
CCL21O00585 TSPY5P-201ENST00000426936 936 ntBASIC17.37■□□□□ 0.37
CCL21O00585 SLC25A1P2-201ENST00000430693 912 ntBASIC17.37■□□□□ 0.37
CCL21O00585 AC008040.2-201ENST00000461049 708 ntBASIC17.37■□□□□ 0.37
CCL21O00585 COX11P1-201ENST00000489116 835 ntBASIC17.37■□□□□ 0.37
CCL21O00585 YBX1P2-201ENST00000489612 999 ntBASIC17.37■□□□□ 0.37
CCL21O00585 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.37■□□□□ 0.37
CCL21O00585 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.37■□□□□ 0.37
CCL21O00585 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
CCL21O00585 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.37■□□□□ 0.37
CCL21O00585 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 HLA-A-209ENST00000638375 975 ntBASIC17.37■□□□□ 0.37
CCL21O00585 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCL21O00585 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL21O00585 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCL21O00585 FEM1AP4-201ENST00000443167 1987 ntBASIC17.37■□□□□ 0.37
CCL21O00585 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL21O00585 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.36■□□□□ 0.37
CCL21O00585 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCL21O00585 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.36■□□□□ 0.37
CCL21O00585 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCL21O00585 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL21O00585 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL21O00585 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL21O00585 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCL21O00585 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.36■□□□□ 0.37
CCL21O00585 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.36■□□□□ 0.37
CCL21O00585 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CCL21O00585 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCL21O00585 AL138966.2-201ENST00000621997 464 ntBASIC17.36■□□□□ 0.37
CCL21O00585 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.36■□□□□ 0.37
CCL21O00585 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CCL21O00585 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCL21O00585 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL21O00585 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.35■□□□□ 0.37
CCL21O00585 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CCL21O00585 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CCL21O00585 AL031133.1-201ENST00000406807 723 ntBASIC17.35■□□□□ 0.37
CCL21O00585 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL21O00585 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL21O00585 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.35■□□□□ 0.37
CCL21O00585 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL21O00585 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.35■□□□□ 0.37
CCL21O00585 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL21O00585 AC010653.2-201ENST00000623505 997 ntBASIC17.35■□□□□ 0.37
CCL21O00585 AC096733.2-201ENST00000609937 1394 ntBASIC17.35■□□□□ 0.37
CCL21O00585 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL21O00585 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCL21O00585 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL21O00585 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCL21O00585 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL21O00585 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCL21O00585 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms