Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 DUX4L6-201ENST00000626483 1275 ntBASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 DUX4L1-201ENST00000627662 1275 ntBASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 DUX4L8-201ENST00000629013 1275 ntBASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 DUX4L3-201ENST00000630187 1275 ntBASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 DUX4L7-201ENST00000630678 1275 ntBASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 DUX4L5-201ENST00000630834 1275 ntBASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 AC009237.14-201ENST00000609975 1594 ntBASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MEIS3P1A6NDR6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 AL049812.1-201ENST00000432563 2267 ntBASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
MEIS3P1A6NDR6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
MEIS3P1A6NDR6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
MEIS3P1A6NDR6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MEIS3P1A6NDR6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MEIS3P1A6NDR6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 MIR939-201ENST00000401314 82 ntBASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 AC105265.2-201ENST00000467189 838 ntBASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 AC106739.1-201ENST00000617035 715 ntBASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MEIS3P1A6NDR6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 EDA-201ENST00000338901 1233 ntBASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 AP001160.3-201ENST00000601484 763 ntBASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 AL358852.1-201ENST00000623174 1268 ntBASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MEIS3P1A6NDR6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms