Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL391903.2-201ENST00000614532 247 ntBASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 AC106782.5-201ENST00000616011 337 ntBASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 AC100835.2-201ENST00000617850 479 ntBASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 AC022167.5-203ENST00000637929 398 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 MTIF2-204ENST00000403721 2386 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 BHLHB9-203ENST00000447531 4031 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 IL4R-202ENST00000395762 3685 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 NPC1L1-202ENST00000381160 4141 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 MTFR1L-210ENST00000474295 1873 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 SECISBP2-209ENST00000534113 3584 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 NREP-205ENST00000446294 2065 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 RGL1-201ENST00000304685 5100 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 AC091167.8-201ENST00000641199 3441 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 SMTNL1-201ENST00000399154 1536 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 AL356019.2-201ENST00000556738 3829 ntBASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 NEFM-201ENST00000221166 4020 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 SLC22A6-201ENST00000360421 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 CYP4F62P-202ENST00000439137 2144 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 DPY19L2-202ENST00000324472 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 C12orf43-201ENST00000288757 4469 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC01597-201ENST00000380888 4472 ntTSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRTAP3-3Q9BYR6 ADCYAP1R1-202ENST00000396211 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 CNBD2-202ENST00000373973 1956 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 BCAS3-217ENST00000588462 3559 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 FRMPD1-202ENST00000377765 4971 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AL512791.2-201ENST00000615251 4609 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 PAK6-213ENST00000560346 4020 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 HK1-202ENST00000359426 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 CFAP65-207ENST00000441968 3416 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 SIRPB2-201ENST00000359801 2642 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 FBLN5-201ENST00000267620 2423 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 GLE1-202ENST00000372770 2218 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 MUM1-214ENST00000591806 4067 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 CAPRIN2-201ENST00000298892 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 COPS4-206ENST00000509093 2273 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 MAPK10-295ENST00000641274 2259 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 NPHS1-201ENST00000353632 3741 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 ZFAT-216ENST00000523399 3734 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AC074281.1-201ENST00000436419 2081 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 RAPGEF6-209ENST00000510071 3107 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 RC3H2-202ENST00000357244 3991 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AC021945.1-201ENST00000623964 1650 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 ADD1-206ENST00000398129 3787 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 PTCH2-201ENST00000372192 4225 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 NSL1-202ENST00000366977 2317 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 TMEM55A-201ENST00000285419 2970 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 RNY4P6-201ENST00000363667 96 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AL353133.2-201ENST00000402173 411 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL304P-201ENST00000488028 301 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AC139453.3-201ENST00000493276 369 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 GAPDHP66-201ENST00000509132 967 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 SNORA31.7-201ENST00000516287 135 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 AC074050.1-201ENST00000563247 211 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 DNM1P28-201ENST00000565702 474 ntBASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 CISTR-201ENST00000570015 581 ntTSL 2 BASIC5.67□□□□□ -1.5
KRTAP3-3Q9BYR6 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms