RNA–Protein interactions for RNA: ENST00000285419.7

TMEM55A-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM55A, Length 2,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-201ENST00000285419 NISCHQ9Y2I1 1504 aa21.11■□□□□ 0.97
TMEM55A-201ENST00000285419 HRCP23327 699 aa18.66■□□□□ 0.58
TMEM55A-201ENST00000285419 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.55
TMEM55A-201ENST00000285419 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
TMEM55A-201ENST00000285419 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
TMEM55A-201ENST00000285419 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
TMEM55A-201ENST00000285419 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
TMEM55A-201ENST00000285419 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
TMEM55A-201ENST00000285419 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
TMEM55A-201ENST00000285419 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
TMEM55A-201ENST00000285419 LOC105371045A0A1W2PR82 267 aa17.79■□□□□ 0.44
TMEM55A-201ENST00000285419 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
TMEM55A-201ENST00000285419 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
TMEM55A-201ENST00000285419 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
TMEM55A-201ENST00000285419 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
TMEM55A-201ENST00000285419 DCAF8L2P0C7V8 631 aa17.48■□□□□ 0.39
TMEM55A-201ENST00000285419 ZEB1P37275 1124 aaPredicted RBP17.46■□□□□ 0.38
TMEM55A-201ENST00000285419 NEUROD1Q13562 356 aa17.28■□□□□ 0.36
TMEM55A-201ENST00000285419 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
TMEM55A-201ENST00000285419 EHMT2Q96KQ7 1210 aa17.23■□□□□ 0.35
TMEM55A-201ENST00000285419 MYT1Q01538 1121 aa17.22■□□□□ 0.35
TMEM55A-201ENST00000285419 GTF3C3Q9Y5Q9 886 aa17.21■□□□□ 0.35
TMEM55A-201ENST00000285419 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
TMEM55A-201ENST00000285419 ABCC9O60706 1549 aa17.08■□□□□ 0.33
TMEM55A-201ENST00000285419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
TMEM55A-201ENST00000285419 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
TMEM55A-201ENST00000285419 TRIM41Q8WV44 630 aa17■□□□□ 0.31
TMEM55A-201ENST00000285419 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
TMEM55A-201ENST00000285419 DIEXFQ68CQ4 756 aaKnown RBP16.99■□□□□ 0.31
TMEM55A-201ENST00000285419 NACADO15069 1562 aa16.99■□□□□ 0.31
TMEM55A-201ENST00000285419 YTHDC1Q96MU7 727 aaKnown RBP16.88■□□□□ 0.29
TMEM55A-201ENST00000285419 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
TMEM55A-201ENST00000285419 TTBK1Q5TCY1 1321 aaPredicted RBP16.8■□□□□ 0.28
TMEM55A-201ENST00000285419 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
TMEM55A-201ENST00000285419 ZNF316A6NFI3 1004 aaPredicted RBP16.59■□□□□ 0.25
TMEM55A-201ENST00000285419 MIER1Q8N108 512 aa16.57■□□□□ 0.24
TMEM55A-201ENST00000285419 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
TMEM55A-201ENST00000285419 UNC13AQ9UPW8 1703 aa16.44■□□□□ 0.22
TMEM55A-201ENST00000285419 CECR2Q9BXF3 1484 aa16.39■□□□□ 0.21
TMEM55A-201ENST00000285419 BCL11AQ9H165 835 aa16.32■□□□□ 0.2
TMEM55A-201ENST00000285419 MROH2BQ7Z745 1585 aa16.32■□□□□ 0.2
TMEM55A-201ENST00000285419 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
TMEM55A-201ENST00000285419 SUPT16HQ9Y5B9 1047 aaKnown RBP16.3■□□□□ 0.2
TMEM55A-201ENST00000285419 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
TMEM55A-201ENST00000285419 ANP32EQ9BTT0 268 aa16.28■□□□□ 0.2
TMEM55A-201ENST00000285419 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.2
TMEM55A-201ENST00000285419 TSHZ2Q9NRE2 1034 aa16.24■□□□□ 0.19
TMEM55A-201ENST00000285419 WIZO95785 1651 aa16.2■□□□□ 0.18
TMEM55A-201ENST00000285419 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
TMEM55A-201ENST00000285419 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
TMEM55A-201ENST00000285419 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
TMEM55A-201ENST00000285419 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
TMEM55A-201ENST00000285419 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
TMEM55A-201ENST00000285419 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
TMEM55A-201ENST00000285419 BCANQ96GW7 911 aa16.13■□□□□ 0.17
TMEM55A-201ENST00000285419 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
TMEM55A-201ENST00000285419 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
TMEM55A-201ENST00000285419 CCDC88BA6NC98 1476 aa16.02■□□□□ 0.16
TMEM55A-201ENST00000285419 SOGA1O94964 1423 aa16.01■□□□□ 0.15
TMEM55A-201ENST00000285419 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
TMEM55A-201ENST00000285419 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
TMEM55A-201ENST00000285419 PEG3Q9GZU2 1588 aa15.97■□□□□ 0.15
TMEM55A-201ENST00000285419 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
TMEM55A-201ENST00000285419 RANGAP1P46060 587 aaPredicted RBP15.97■□□□□ 0.15
TMEM55A-201ENST00000285419 FKBP8Q14318 412 aa15.93■□□□□ 0.14
TMEM55A-201ENST00000285419 RUSC2Q8N2Y8 1516 aa15.92■□□□□ 0.14
TMEM55A-201ENST00000285419 APLP2Q06481 763 aa15.9■□□□□ 0.14
TMEM55A-201ENST00000285419 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
TMEM55A-201ENST00000285419 RBM19Q9Y4C8 960 aaKnown RBP15.88■□□□□ 0.13
TMEM55A-201ENST00000285419 ITGAEP38570 1179 aa15.86■□□□□ 0.13
TMEM55A-201ENST00000285419 ATAD2BQ9ULI0 1458 aa15.86■□□□□ 0.13
TMEM55A-201ENST00000285419 EIF4G1Q04637 1599 aaKnown RBP15.86■□□□□ 0.13
TMEM55A-201ENST00000285419 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
TMEM55A-201ENST00000285419 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
TMEM55A-201ENST00000285419 DHX57Q6P158 1386 aaKnown RBP15.78■□□□□ 0.12
TMEM55A-201ENST00000285419 NEFLP07196 543 aa15.76■□□□□ 0.11
TMEM55A-201ENST00000285419 CLIP1P30622 1438 aa15.74■□□□□ 0.11
TMEM55A-201ENST00000285419 MSH5O43196 834 aa15.74■□□□□ 0.11
TMEM55A-201ENST00000285419 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
TMEM55A-201ENST00000285419 DDX10Q13206 875 aaKnown RBP15.71■□□□□ 0.11
TMEM55A-201ENST00000285419 EEA1Q15075 1411 aa15.71■□□□□ 0.1
TMEM55A-201ENST00000285419 NCAPD3P42695 1498 aa15.68■□□□□ 0.1
TMEM55A-201ENST00000285419 ERICH6Q7L0X2 663 aa15.67■□□□□ 0.1
TMEM55A-201ENST00000285419 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
TMEM55A-201ENST00000285419 VPS8Q8N3P4 1428 aa15.67■□□□□ 0.1
TMEM55A-201ENST00000285419 PRKCSHP14314 528 aaPredicted RBP15.63■□□□□ 0.09
TMEM55A-201ENST00000285419 HIRIP3Q9BW71 556 aaPredicted RBP15.62■□□□□ 0.09
TMEM55A-201ENST00000285419 KANK4Q5T7N3 995 aaPredicted RBP15.6■□□□□ 0.09
TMEM55A-201ENST00000285419 CEP164Q9UPV0 1460 aa15.6■□□□□ 0.09
TMEM55A-201ENST00000285419 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
TMEM55A-201ENST00000285419 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
TMEM55A-201ENST00000285419 CDK11AQ9UQ88 783 aaPredicted RBP15.51■□□□□ 0.07
TMEM55A-201ENST00000285419 KIF21BO75037 1637 aa15.5■□□□□ 0.07
TMEM55A-201ENST00000285419 SIN3AQ96ST3 1273 aa15.49■□□□□ 0.07
TMEM55A-201ENST00000285419 DEKP35659 375 aaKnown RBP15.49■□□□□ 0.07
TMEM55A-201ENST00000285419 ANP32CO43423 234 aa15.48■□□□□ 0.07
TMEM55A-201ENST00000285419 FANCIQ9NVI1 1328 aa15.48■□□□□ 0.07
TMEM55A-201ENST00000285419 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.07
TMEM55A-201ENST00000285419 PPP1R15AO75807 674 aaPredicted RBP15.45■□□□□ 0.06
TMEM55A-201ENST00000285419 NBR1Q14596 966 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms