RNA–Protein interactions for RNA: ENST00000288757.7

C12orf43-201, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C12orf43, Length 4,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-201ENST00000288757 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
C12orf43-201ENST00000288757 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
C12orf43-201ENST00000288757 NISCHQ9Y2I1 1504 aa18.28■□□□□ 0.52
C12orf43-201ENST00000288757 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
C12orf43-201ENST00000288757 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
C12orf43-201ENST00000288757 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
C12orf43-201ENST00000288757 FAM9AQ8IZU1 332 aaPredicted RBP17.33■□□□□ 0.36
C12orf43-201ENST00000288757 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
C12orf43-201ENST00000288757 RANGAP1P46060 587 aaPredicted RBP16.89■□□□□ 0.29
C12orf43-201ENST00000288757 PPARGC1BQ86YN6 1023 aaKnown RBP16.83■□□□□ 0.29
C12orf43-201ENST00000288757 APLP2Q06481 763 aa16.75■□□□□ 0.27
C12orf43-201ENST00000288757 CCER1Q8TC90 406 aaPredicted RBP16.69■□□□□ 0.26
C12orf43-201ENST00000288757 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
C12orf43-201ENST00000288757 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
C12orf43-201ENST00000288757 PELP1Q8IZL8 1130 aaKnown RBP16.61■□□□□ 0.25
C12orf43-201ENST00000288757 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
C12orf43-201ENST00000288757 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
C12orf43-201ENST00000288757 UBTFP17480 764 aaKnown RBP16.45■□□□□ 0.22
C12orf43-201ENST00000288757 ATP1B4Q9UN42 357 aaPredicted RBP16.43■□□□□ 0.22
C12orf43-201ENST00000288757 HRCP23327 699 aa16.42■□□□□ 0.22
C12orf43-201ENST00000288757 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
C12orf43-201ENST00000288757 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
C12orf43-201ENST00000288757 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
C12orf43-201ENST00000288757 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
C12orf43-201ENST00000288757 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
C12orf43-201ENST00000288757 ITGAEP38570 1179 aa16.17■□□□□ 0.18
C12orf43-201ENST00000288757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
C12orf43-201ENST00000288757 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
C12orf43-201ENST00000288757 CNGB1Q14028 1251 aaPredicted RBP16.07■□□□□ 0.16
C12orf43-201ENST00000288757 NEFLP07196 543 aa16.01■□□□□ 0.15
C12orf43-201ENST00000288757 POLR3GLQ9BT43 218 aa15.9■□□□□ 0.14
C12orf43-201ENST00000288757 DIEXFQ68CQ4 756 aaKnown RBP15.87■□□□□ 0.13
C12orf43-201ENST00000288757 GTF3C3Q9Y5Q9 886 aa15.77■□□□□ 0.12
C12orf43-201ENST00000288757 MYT1Q01538 1121 aa15.75■□□□□ 0.11
C12orf43-201ENST00000288757 BCANQ96GW7 911 aa15.72■□□□□ 0.11
C12orf43-201ENST00000288757 NEUROD1Q13562 356 aa15.59■□□□□ 0.09
C12orf43-201ENST00000288757 MYO15BQ96JP2 1530 aa15.54■□□□□ 0.08
C12orf43-201ENST00000288757 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
C12orf43-201ENST00000288757 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
C12orf43-201ENST00000288757 MYT1LQ9UL68 1186 aa15.47■□□□□ 0.07
C12orf43-201ENST00000288757 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
C12orf43-201ENST00000288757 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
C12orf43-201ENST00000288757 DAXXQ9UER7 740 aaPredicted RBP15.43■□□□□ 0.06
C12orf43-201ENST00000288757 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
C12orf43-201ENST00000288757 TRIM52Q96A61 297 aa15.35■□□□□ 0.05
C12orf43-201ENST00000288757 ZNF326Q5BKZ1 582 aaKnown RBP15.35■□□□□ 0.05
C12orf43-201ENST00000288757 SLC4A1APQ9BWU0 796 aaKnown RBP15.34■□□□□ 0.05
C12orf43-201ENST00000288757 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
C12orf43-201ENST00000288757 ARID3CA6NKF2 412 aa15.3■□□□□ 0.04
C12orf43-201ENST00000288757 ZCCHC6Q5VYS8 1495 aaKnown RBP15.28■□□□□ 0.04
C12orf43-201ENST00000288757 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.03
C12orf43-201ENST00000288757 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
C12orf43-201ENST00000288757 RTL5Q5HYW3 569 aaPredicted RBP15.23■□□□□ 0.03
C12orf43-201ENST00000288757 ABCC9O60706 1549 aa15.23■□□□□ 0.03
C12orf43-201ENST00000288757 ANP32CO43423 234 aa15.21■□□□□ 0.03
C12orf43-201ENST00000288757 NACADO15069 1562 aa15.21■□□□□ 0.03
C12orf43-201ENST00000288757 BCL11AQ9H165 835 aa15.2■□□□□ 0.02
C12orf43-201ENST00000288757 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
C12orf43-201ENST00000288757 RB1CC1Q8TDY2 1594 aa15.15■□□□□ 0.02
C12orf43-201ENST00000288757 FKBP8Q14318 412 aa15.14■□□□□ 0.01
C12orf43-201ENST00000288757 HIRIP3Q9BW71 556 aaPredicted RBP15.13■□□□□ 0.01
C12orf43-201ENST00000288757 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
C12orf43-201ENST00000288757 CDK11AQ9UQ88 783 aaPredicted RBP15.12■□□□□ 0.01
C12orf43-201ENST00000288757 MIER1Q8N108 512 aa15.09■□□□□ 0.01
C12orf43-201ENST00000288757 FBLN2P98095 1184 aa15.06■□□□□ 0
C12orf43-201ENST00000288757 NPM2Q86SE8 214 aaKnown RBP15.05■□□□□ -0
C12orf43-201ENST00000288757 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ -0
C12orf43-201ENST00000288757 SENP3-EIF4A1A0A087X0R7 540 aa15.03■□□□□ -0
C12orf43-201ENST00000288757 IRX6P78412 446 aaPredicted RBP15.02□□□□□ -0.01
C12orf43-201ENST00000288757 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.01
C12orf43-201ENST00000288757 FAM9BQ8IZU0 186 aa14.98□□□□□ -0.01
C12orf43-201ENST00000288757 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
C12orf43-201ENST00000288757 CHIC2Q9UKJ5 165 aa14.91□□□□□ -0.02
C12orf43-201ENST00000288757 NBR1Q14596 966 aa14.88□□□□□ -0.03
C12orf43-201ENST00000288757 EIF5BO60841 1220 aaKnown RBP14.83□□□□□ -0.03
C12orf43-201ENST00000288757 CANXP27824 592 aaKnown RBP14.82□□□□□ -0.04
C12orf43-201ENST00000288757 ANP32AP39687 249 aaKnown RBP14.82□□□□□ -0.04
C12orf43-201ENST00000288757 SLC24A1O60721 1099 aa14.8□□□□□ -0.04
C12orf43-201ENST00000288757 TONSLQ96HA7 1378 aa14.79□□□□□ -0.04
C12orf43-201ENST00000288757 ARXQ96QS3 562 aa14.77□□□□□ -0.04
C12orf43-201ENST00000288757 MRS2Q9HD23 443 aa14.72□□□□□ -0.05
C12orf43-201ENST00000288757 KDM2AQ9Y2K7 1162 aa14.72□□□□□ -0.05
C12orf43-201ENST00000288757 CCDC136Q96JN2 1154 aa14.72□□□□□ -0.05
C12orf43-201ENST00000288757 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
C12orf43-201ENST00000288757 TMC1Q8TDI8 760 aa14.68□□□□□ -0.06
C12orf43-201ENST00000288757 SCRIBQ14160 1630 aa14.66□□□□□ -0.06
C12orf43-201ENST00000288757 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
C12orf43-201ENST00000288757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
C12orf43-201ENST00000288757 RRP7BPQ9NSQ0 103 aa14.66□□□□□ -0.06
C12orf43-201ENST00000288757 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
C12orf43-201ENST00000288757 SIN3AQ96ST3 1273 aa14.64□□□□□ -0.07
C12orf43-201ENST00000288757 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
C12orf43-201ENST00000288757 CLIP1P30622 1438 aa14.57□□□□□ -0.08
C12orf43-201ENST00000288757 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
C12orf43-201ENST00000288757 UNC13AQ9UPW8 1703 aa14.55□□□□□ -0.08
C12orf43-201ENST00000288757 CEP162Q5TB80 1403 aa14.53□□□□□ -0.08
C12orf43-201ENST00000288757 HSP90AA1P07900 732 aaKnown RBP14.53□□□□□ -0.08
C12orf43-201ENST00000288757 RGL3Q3MIN7 710 aa14.52□□□□□ -0.09
C12orf43-201ENST00000288757 NEFMP07197 916 aa14.5□□□□□ -0.09
C12orf43-201ENST00000288757 EIF4G2P78344 907 aaKnown RBP eCLIP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms