RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
PTCH2-201ENST00000372192 SUPT5HO00267 1087 aaKnown RBP19.25■□□□□ 0.67
PTCH2-201ENST00000372192 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
PTCH2-201ENST00000372192 DCAF8L2P0C7V8 631 aa19.08■□□□□ 0.65
PTCH2-201ENST00000372192 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
PTCH2-201ENST00000372192 HRCP23327 699 aa18.38■□□□□ 0.53
PTCH2-201ENST00000372192 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.51
PTCH2-201ENST00000372192 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
PTCH2-201ENST00000372192 TRIM26Q12899 539 aaPredicted RBP17.96■□□□□ 0.46
PTCH2-201ENST00000372192 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
PTCH2-201ENST00000372192 PPARGC1BQ86YN6 1023 aaKnown RBP17.93■□□□□ 0.46
PTCH2-201ENST00000372192 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
PTCH2-201ENST00000372192 FAM9AQ8IZU1 332 aaPredicted RBP17.91■□□□□ 0.46
PTCH2-201ENST00000372192 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
PTCH2-201ENST00000372192 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
PTCH2-201ENST00000372192 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
PTCH2-201ENST00000372192 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
PTCH2-201ENST00000372192 DCAF1Q9Y4B6 1507 aa17.6■□□□□ 0.41
PTCH2-201ENST00000372192 CCER1Q8TC90 406 aaPredicted RBP17.58■□□□□ 0.41
PTCH2-201ENST00000372192 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
PTCH2-201ENST00000372192 CENPBP07199 599 aaPredicted RBP17.52■□□□□ 0.4
PTCH2-201ENST00000372192 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
PTCH2-201ENST00000372192 APLP2Q06481 763 aa17.29■□□□□ 0.36
PTCH2-201ENST00000372192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
PTCH2-201ENST00000372192 UBTFP17480 764 aaKnown RBP17.22■□□□□ 0.35
PTCH2-201ENST00000372192 MYT1Q01538 1121 aa17.19■□□□□ 0.34
PTCH2-201ENST00000372192 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
PTCH2-201ENST00000372192 YTHDC1Q96MU7 727 aaKnown RBP17.11■□□□□ 0.33
PTCH2-201ENST00000372192 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
PTCH2-201ENST00000372192 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
PTCH2-201ENST00000372192 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
PTCH2-201ENST00000372192 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
PTCH2-201ENST00000372192 GTF3C3Q9Y5Q9 886 aa16.99■□□□□ 0.31
PTCH2-201ENST00000372192 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
PTCH2-201ENST00000372192 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
PTCH2-201ENST00000372192 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
PTCH2-201ENST00000372192 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
PTCH2-201ENST00000372192 ABCC9O60706 1549 aa16.84■□□□□ 0.29
PTCH2-201ENST00000372192 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
PTCH2-201ENST00000372192 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
PTCH2-201ENST00000372192 NEFLP07196 543 aa16.58■□□□□ 0.24
PTCH2-201ENST00000372192 CEP162Q5TB80 1403 aa16.57■□□□□ 0.24
PTCH2-201ENST00000372192 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
PTCH2-201ENST00000372192 ITGAEP38570 1179 aa16.55■□□□□ 0.24
PTCH2-201ENST00000372192 NACADO15069 1562 aa16.51■□□□□ 0.23
PTCH2-201ENST00000372192 EEA1Q15075 1411 aa16.5■□□□□ 0.23
PTCH2-201ENST00000372192 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
PTCH2-201ENST00000372192 ATP1B4Q9UN42 357 aaPredicted RBP16.5■□□□□ 0.23
PTCH2-201ENST00000372192 MIER1Q8N108 512 aa16.48■□□□□ 0.23
PTCH2-201ENST00000372192 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
PTCH2-201ENST00000372192 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
PTCH2-201ENST00000372192 CLSPNQ9HAW4 1339 aa16.42■□□□□ 0.22
PTCH2-201ENST00000372192 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
PTCH2-201ENST00000372192 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
PTCH2-201ENST00000372192 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
PTCH2-201ENST00000372192 CLIP1P30622 1438 aa16.37■□□□□ 0.21
PTCH2-201ENST00000372192 SOGA1O94964 1423 aa16.33■□□□□ 0.21
PTCH2-201ENST00000372192 WIZO95785 1651 aa16.31■□□□□ 0.2
PTCH2-201ENST00000372192 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
PTCH2-201ENST00000372192 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
PTCH2-201ENST00000372192 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
PTCH2-201ENST00000372192 CEP164Q9UPV0 1460 aa16.26■□□□□ 0.19
PTCH2-201ENST00000372192 BCANQ96GW7 911 aa16.26■□□□□ 0.19
PTCH2-201ENST00000372192 FAM50AQ14320 339 aaKnown RBP16.24■□□□□ 0.19
PTCH2-201ENST00000372192 ANP32CO43423 234 aa16.17■□□□□ 0.18
PTCH2-201ENST00000372192 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
PTCH2-201ENST00000372192 VPS8Q8N3P4 1428 aa16.13■□□□□ 0.17
PTCH2-201ENST00000372192 FKBP8Q14318 412 aa16.1■□□□□ 0.17
PTCH2-201ENST00000372192 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
PTCH2-201ENST00000372192 SUPT16HQ9Y5B9 1047 aaKnown RBP16.06■□□□□ 0.16
PTCH2-201ENST00000372192 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
PTCH2-201ENST00000372192 CDK11AQ9UQ88 783 aaPredicted RBP15.99■□□□□ 0.15
PTCH2-201ENST00000372192 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
PTCH2-201ENST00000372192 P3H3Q8IVL6 736 aa15.98■□□□□ 0.15
PTCH2-201ENST00000372192 BAZ1BQ9UIG0 1483 aaKnown RBP15.98■□□□□ 0.15
PTCH2-201ENST00000372192 SMARCA2P51531 1590 aa15.96■□□□□ 0.15
PTCH2-201ENST00000372192 TRIM52Q96A61 297 aa15.94■□□□□ 0.14
PTCH2-201ENST00000372192 TONSLQ96HA7 1378 aa15.93■□□□□ 0.14
PTCH2-201ENST00000372192 ANP32EQ9BTT0 268 aa15.93■□□□□ 0.14
PTCH2-201ENST00000372192 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
PTCH2-201ENST00000372192 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
PTCH2-201ENST00000372192 KANK4Q5T7N3 995 aaPredicted RBP15.91■□□□□ 0.14
PTCH2-201ENST00000372192 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
PTCH2-201ENST00000372192 DHX57Q6P158 1386 aaKnown RBP15.88■□□□□ 0.13
PTCH2-201ENST00000372192 POLR3GLQ9BT43 218 aa15.87■□□□□ 0.13
PTCH2-201ENST00000372192 HNRNPUQ00839 825 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTCH2-201ENST00000372192 HIRIP3Q9BW71 556 aaPredicted RBP15.86■□□□□ 0.13
PTCH2-201ENST00000372192 CNGB1Q14028 1251 aaPredicted RBP15.83■□□□□ 0.12
PTCH2-201ENST00000372192 SIN3AQ96ST3 1273 aa15.81■□□□□ 0.12
PTCH2-201ENST00000372192 TSHZ2Q9NRE2 1034 aa15.81■□□□□ 0.12
PTCH2-201ENST00000372192 TIMELESSQ9UNS1 1208 aa15.78■□□□□ 0.12
PTCH2-201ENST00000372192 RAB3GAP2Q9H2M9 1393 aa15.76■□□□□ 0.11
PTCH2-201ENST00000372192 KIF21BO75037 1637 aa15.76■□□□□ 0.11
PTCH2-201ENST00000372192 SETD5Q9C0A6 1442 aa15.75■□□□□ 0.11
PTCH2-201ENST00000372192 RTL5Q5HYW3 569 aaPredicted RBP15.74■□□□□ 0.11
PTCH2-201ENST00000372192 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
PTCH2-201ENST00000372192 MTUS2Q5JR59 1369 aa15.71■□□□□ 0.11
PTCH2-201ENST00000372192 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.1
PTCH2-201ENST00000372192 IRX6P78412 446 aaPredicted RBP15.69■□□□□ 0.1
PTCH2-201ENST00000372192 FHAD1B1AJZ9 1412 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms