RNA–Protein interactions for RNA: ENST00000380888.4

LINC01597-201, Transcript of long intergenic non-protein coding RNA 1597, humanhuman

TSL 5 BASIC

Gene LINC01597, Length 4,472 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01597-201ENST00000380888 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
LINC01597-201ENST00000380888 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
LINC01597-201ENST00000380888 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
LINC01597-201ENST00000380888 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
LINC01597-201ENST00000380888 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
LINC01597-201ENST00000380888 FAM9AQ8IZU1 332 aaPredicted RBP19.17■□□□□ 0.66
LINC01597-201ENST00000380888 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
LINC01597-201ENST00000380888 ABCC9O60706 1549 aa18.89■□□□□ 0.61
LINC01597-201ENST00000380888 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
LINC01597-201ENST00000380888 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
LINC01597-201ENST00000380888 TTBK1Q5TCY1 1321 aaPredicted RBP18.7■□□□□ 0.58
LINC01597-201ENST00000380888 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
LINC01597-201ENST00000380888 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
LINC01597-201ENST00000380888 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
LINC01597-201ENST00000380888 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
LINC01597-201ENST00000380888 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
LINC01597-201ENST00000380888 APLP2Q06481 763 aa18.46■□□□□ 0.55
LINC01597-201ENST00000380888 UBTFP17480 764 aaKnown RBP18.44■□□□□ 0.54
LINC01597-201ENST00000380888 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
LINC01597-201ENST00000380888 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
LINC01597-201ENST00000380888 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
LINC01597-201ENST00000380888 CCER1Q8TC90 406 aaPredicted RBP18.14■□□□□ 0.49
LINC01597-201ENST00000380888 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
LINC01597-201ENST00000380888 HRCP23327 699 aa18.03■□□□□ 0.48
LINC01597-201ENST00000380888 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
LINC01597-201ENST00000380888 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
LINC01597-201ENST00000380888 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
LINC01597-201ENST00000380888 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
LINC01597-201ENST00000380888 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
LINC01597-201ENST00000380888 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
LINC01597-201ENST00000380888 NACADO15069 1562 aa17.78■□□□□ 0.44
LINC01597-201ENST00000380888 ITGAEP38570 1179 aa17.76■□□□□ 0.43
LINC01597-201ENST00000380888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.74■□□□□ 0.43
LINC01597-201ENST00000380888 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
LINC01597-201ENST00000380888 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
LINC01597-201ENST00000380888 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
LINC01597-201ENST00000380888 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
LINC01597-201ENST00000380888 CENPBP07199 599 aaPredicted RBP17.45■□□□□ 0.38
LINC01597-201ENST00000380888 P3H3Q8IVL6 736 aa17.43■□□□□ 0.38
LINC01597-201ENST00000380888 BAZ1AQ9NRL2 1556 aaPredicted RBP17.43■□□□□ 0.38
LINC01597-201ENST00000380888 FAM50AQ14320 339 aaKnown RBP17.37■□□□□ 0.37
LINC01597-201ENST00000380888 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
LINC01597-201ENST00000380888 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.36
LINC01597-201ENST00000380888 WIZO95785 1651 aa17.26■□□□□ 0.35
LINC01597-201ENST00000380888 FBLN2P98095 1184 aa17.25■□□□□ 0.35
LINC01597-201ENST00000380888 DIEXFQ68CQ4 756 aaKnown RBP17.25■□□□□ 0.35
LINC01597-201ENST00000380888 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
LINC01597-201ENST00000380888 CCDC88BA6NC98 1476 aa17.22■□□□□ 0.35
LINC01597-201ENST00000380888 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
LINC01597-201ENST00000380888 SOGA1O94964 1423 aa17.17■□□□□ 0.34
LINC01597-201ENST00000380888 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
LINC01597-201ENST00000380888 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
LINC01597-201ENST00000380888 CEP162Q5TB80 1403 aa17.16■□□□□ 0.34
LINC01597-201ENST00000380888 CLIP1P30622 1438 aa17.13■□□□□ 0.33
LINC01597-201ENST00000380888 EEA1Q15075 1411 aa17.1■□□□□ 0.33
LINC01597-201ENST00000380888 GOLGA3Q08378 1498 aa17.08■□□□□ 0.33
LINC01597-201ENST00000380888 TRIM52Q96A61 297 aa17.08■□□□□ 0.32
LINC01597-201ENST00000380888 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
LINC01597-201ENST00000380888 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
LINC01597-201ENST00000380888 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
LINC01597-201ENST00000380888 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
LINC01597-201ENST00000380888 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
LINC01597-201ENST00000380888 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
LINC01597-201ENST00000380888 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
LINC01597-201ENST00000380888 CEP164Q9UPV0 1460 aa16.96■□□□□ 0.31
LINC01597-201ENST00000380888 KIF27Q86VH2 1401 aa16.95■□□□□ 0.3
LINC01597-201ENST00000380888 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
LINC01597-201ENST00000380888 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
LINC01597-201ENST00000380888 NEFLP07196 543 aa16.88■□□□□ 0.29
LINC01597-201ENST00000380888 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
LINC01597-201ENST00000380888 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
LINC01597-201ENST00000380888 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.28
LINC01597-201ENST00000380888 CHIC2Q9UKJ5 165 aa16.82■□□□□ 0.28
LINC01597-201ENST00000380888 CUX2O14529 1486 aa16.82■□□□□ 0.28
LINC01597-201ENST00000380888 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
LINC01597-201ENST00000380888 CDK11AQ9UQ88 783 aaPredicted RBP16.77■□□□□ 0.28
LINC01597-201ENST00000380888 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.27
LINC01597-201ENST00000380888 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
LINC01597-201ENST00000380888 GTF3C3Q9Y5Q9 886 aa16.75■□□□□ 0.27
LINC01597-201ENST00000380888 KANK4Q5T7N3 995 aaPredicted RBP16.7■□□□□ 0.26
LINC01597-201ENST00000380888 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
LINC01597-201ENST00000380888 RAPGEF2Q9Y4G8 1499 aa16.68■□□□□ 0.26
LINC01597-201ENST00000380888 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
LINC01597-201ENST00000380888 ANP32CO43423 234 aa16.66■□□□□ 0.26
LINC01597-201ENST00000380888 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
LINC01597-201ENST00000380888 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
LINC01597-201ENST00000380888 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
LINC01597-201ENST00000380888 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
LINC01597-201ENST00000380888 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
LINC01597-201ENST00000380888 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
LINC01597-201ENST00000380888 MIER1Q8N108 512 aa16.59■□□□□ 0.25
LINC01597-201ENST00000380888 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
LINC01597-201ENST00000380888 BCANQ96GW7 911 aa16.55■□□□□ 0.24
LINC01597-201ENST00000380888 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
LINC01597-201ENST00000380888 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
LINC01597-201ENST00000380888 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
LINC01597-201ENST00000380888 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
LINC01597-201ENST00000380888 NCAPD3P42695 1498 aa16.52■□□□□ 0.24
LINC01597-201ENST00000380888 PDS5BQ9NTI5 1447 aa16.52■□□□□ 0.24
LINC01597-201ENST00000380888 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms