Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 AC124016.1-201ENST00000609552 612 ntBASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 AL023875.1-201ENST00000640777 796 ntBASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FNDC3AQ9Y2H6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 AC073130.3-201ENST00000624389 2278 ntBASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FNDC3AQ9Y2H6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.11■□□□□ 0.81
FNDC3AQ9Y2H6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 AC239809.2-201ENST00000415381 517 ntBASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 KRT18P21-201ENST00000515767 1272 ntBASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 AC010331.1-201ENST00000611423 582 ntBASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FNDC3AQ9Y2H6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FNDC3AQ9Y2H6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms