Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 AIRN-201ENST00000601203 4374 ntBASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHMP2BQ9UQN3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 HLA-G-202ENST00000376815 851 ntBASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 HLA-G-203ENST00000376818 1127 ntBASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CHMP2BQ9UQN3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 PHGDH-210ENST00000641115 1638 ntBASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 AC008694.1-202ENST00000636953 945 ntBASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 AL032819.2-201ENST00000624543 2162 ntBASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.02■□□□□ 0.8
CHMP2BQ9UQN3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP2BQ9UQN3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CHMP2BQ9UQN3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CHMP2BQ9UQN3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP2BQ9UQN3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP2BQ9UQN3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP2BQ9UQN3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP2BQ9UQN3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 BID-214ENST00000617586 542 ntTSL 5 BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CHMP2BQ9UQN3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20■□□□□ 0.79
CHMP2BQ9UQN3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP2BQ9UQN3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms