Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NLKQ9UBE8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NLKQ9UBE8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.44■□□□□ 0.38
NLKQ9UBE8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.44■□□□□ 0.38
NLKQ9UBE8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.44■□□□□ 0.38
NLKQ9UBE8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.44■□□□□ 0.38
NLKQ9UBE8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.44■□□□□ 0.38
NLKQ9UBE8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.44■□□□□ 0.38
NLKQ9UBE8 RARRES2P11-201ENST00000635158 484 ntBASIC17.44■□□□□ 0.38
NLKQ9UBE8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NLKQ9UBE8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NLKQ9UBE8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NLKQ9UBE8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NLKQ9UBE8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NLKQ9UBE8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NLKQ9UBE8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.44■□□□□ 0.38
NLKQ9UBE8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 Z82202.1-201ENST00000623446 1880 ntBASIC17.43■□□□□ 0.38
NLKQ9UBE8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.43■□□□□ 0.38
NLKQ9UBE8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NLKQ9UBE8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NLKQ9UBE8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.42■□□□□ 0.38
NLKQ9UBE8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NLKQ9UBE8 AC090340.1-201ENST00000620778 4980 ntBASIC17.41■□□□□ 0.38
NLKQ9UBE8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NLKQ9UBE8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NLKQ9UBE8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NLKQ9UBE8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NLKQ9UBE8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NLKQ9UBE8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NLKQ9UBE8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.41■□□□□ 0.38
NLKQ9UBE8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
NLKQ9UBE8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NLKQ9UBE8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.41■□□□□ 0.38
NLKQ9UBE8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.41■□□□□ 0.38
NLKQ9UBE8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.41■□□□□ 0.38
NLKQ9UBE8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.41■□□□□ 0.38
NLKQ9UBE8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.41■□□□□ 0.38
NLKQ9UBE8 AC243732.1-201ENST00000612648 864 ntBASIC17.41■□□□□ 0.38
NLKQ9UBE8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.41■□□□□ 0.38
NLKQ9UBE8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NLKQ9UBE8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NLKQ9UBE8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NLKQ9UBE8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms