Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARPBPQ9NWS1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARPBPQ9NWS1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PARPBPQ9NWS1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.62■□□□□ 0.41
PARPBPQ9NWS1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 KRT18P29-201ENST00000397031 1267 ntBASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 PRKY-204ENST00000533551 1019 ntBASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PARPBPQ9NWS1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 PHGDH-210ENST00000641115 1638 ntBASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PARPBPQ9NWS1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 ITM2C-210ENST00000620962 501 ntBASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PARPBPQ9NWS1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PARPBPQ9NWS1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PARPBPQ9NWS1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PARPBPQ9NWS1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.58■□□□□ 0.41
PARPBPQ9NWS1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
PARPBPQ9NWS1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PARPBPQ9NWS1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.58■□□□□ 0.41
PARPBPQ9NWS1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PARPBPQ9NWS1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 AC128676.1-201ENST00000454392 318 ntBASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PARPBPQ9NWS1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms