Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GDF3Q9NR23 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GDF3Q9NR23 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF3Q9NR23 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF3Q9NR23 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.77■□□□□ 0.92
GDF3Q9NR23 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF3Q9NR23 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GDF3Q9NR23 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF3Q9NR23 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDF3Q9NR23 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
GDF3Q9NR23 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GDF3Q9NR23 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GDF3Q9NR23 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF3Q9NR23 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GDF3Q9NR23 RBM17P2-201ENST00000616397 1405 ntBASIC20.77■□□□□ 0.91
GDF3Q9NR23 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GDF3Q9NR23 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
GDF3Q9NR23 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.77■□□□□ 0.91
GDF3Q9NR23 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
GDF3Q9NR23 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
GDF3Q9NR23 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
GDF3Q9NR23 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF3Q9NR23 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF3Q9NR23 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF3Q9NR23 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.76■□□□□ 0.91
GDF3Q9NR23 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.76■□□□□ 0.91
GDF3Q9NR23 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF3Q9NR23 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF3Q9NR23 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.76■□□□□ 0.91
GDF3Q9NR23 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.76■□□□□ 0.91
GDF3Q9NR23 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.76■□□□□ 0.91
GDF3Q9NR23 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GDF3Q9NR23 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.76■□□□□ 0.91
GDF3Q9NR23 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.76■□□□□ 0.91
GDF3Q9NR23 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
GDF3Q9NR23 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF3Q9NR23 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GDF3Q9NR23 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 KRT18P29-201ENST00000397031 1267 ntBASIC20.75■□□□□ 0.91
GDF3Q9NR23 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
GDF3Q9NR23 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GDF3Q9NR23 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 AC243732.1-201ENST00000612648 864 ntBASIC20.74■□□□□ 0.91
GDF3Q9NR23 ITM2C-210ENST00000620962 501 ntBASIC20.74■□□□□ 0.91
GDF3Q9NR23 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.74■□□□□ 0.91
GDF3Q9NR23 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
GDF3Q9NR23 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
GDF3Q9NR23 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
GDF3Q9NR23 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms