Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD248Q9HCU0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD248Q9HCU0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.65■□□□□ 0.9
CD248Q9HCU0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD248Q9HCU0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD248Q9HCU0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CD248Q9HCU0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD248Q9HCU0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD248Q9HCU0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD248Q9HCU0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CD248Q9HCU0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.64■□□□□ 0.89
CD248Q9HCU0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.64■□□□□ 0.89
CD248Q9HCU0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CD248Q9HCU0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.64■□□□□ 0.89
CD248Q9HCU0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.64■□□□□ 0.89
CD248Q9HCU0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD248Q9HCU0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.63■□□□□ 0.89
CD248Q9HCU0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CD248Q9HCU0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.63■□□□□ 0.89
CD248Q9HCU0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.63■□□□□ 0.89
CD248Q9HCU0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
CD248Q9HCU0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.63■□□□□ 0.89
CD248Q9HCU0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.63■□□□□ 0.89
CD248Q9HCU0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.63■□□□□ 0.89
CD248Q9HCU0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD248Q9HCU0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CD248Q9HCU0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.62■□□□□ 0.89
CD248Q9HCU0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CD248Q9HCU0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CD248Q9HCU0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CD248Q9HCU0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.62■□□□□ 0.89
CD248Q9HCU0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD248Q9HCU0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CD248Q9HCU0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.61■□□□□ 0.89
CD248Q9HCU0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.61■□□□□ 0.89
CD248Q9HCU0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 MTDHP1-201ENST00000605323 784 ntBASIC20.61■□□□□ 0.89
CD248Q9HCU0 FAM197Y4-202ENST00000622692 608 ntBASIC20.61■□□□□ 0.89
CD248Q9HCU0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.61■□□□□ 0.89
CD248Q9HCU0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CD248Q9HCU0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD248Q9HCU0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD248Q9HCU0 NEFHP1-201ENST00000412845 2629 ntBASIC20.6■□□□□ 0.89
CD248Q9HCU0 AP000974.1-201ENST00000623909 2387 ntBASIC20.6■□□□□ 0.89
CD248Q9HCU0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.6■□□□□ 0.89
CD248Q9HCU0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD248Q9HCU0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.6■□□□□ 0.89
CD248Q9HCU0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD248Q9HCU0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CD248Q9HCU0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD248Q9HCU0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD248Q9HCU0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD248Q9HCU0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD248Q9HCU0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CD248Q9HCU0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms