Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 AC026471.1-201ENST00000564629 3026 ntBASIC18.23■□□□□ 0.51
TM9SF2Q99805 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TM9SF2Q99805 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.23■□□□□ 0.51
TM9SF2Q99805 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 AC026366.1-201ENST00000488803 879 ntBASIC18.22■□□□□ 0.51
TM9SF2Q99805 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TM9SF2Q99805 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.22■□□□□ 0.51
TM9SF2Q99805 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.21■□□□□ 0.51
TM9SF2Q99805 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.21■□□□□ 0.51
TM9SF2Q99805 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TM9SF2Q99805 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.21■□□□□ 0.51
TM9SF2Q99805 AP003097.1-201ENST00000530657 1135 ntBASIC18.21■□□□□ 0.51
TM9SF2Q99805 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.21■□□□□ 0.51
TM9SF2Q99805 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.21■□□□□ 0.51
TM9SF2Q99805 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TM9SF2Q99805 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TM9SF2Q99805 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
TM9SF2Q99805 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.2■□□□□ 0.5
TM9SF2Q99805 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 AC092368.3-202ENST00000574180 1591 ntBASIC18.2■□□□□ 0.5
TM9SF2Q99805 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TM9SF2Q99805 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TM9SF2Q99805 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TM9SF2Q99805 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms