Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 AC069152.1-201ENST00000438030 544 ntBASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 AC133041.1-202ENST00000642053 222 ntBASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDF1Q96CC6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 AC060766.5-201ENST00000590539 871 ntBASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 TFP1-202ENST00000475455 1573 ntBASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
RHBDF1Q96CC6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 PNMA6B-201ENST00000538162 1200 ntBASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RHBDF1Q96CC6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 AC124283.5-201ENST00000624661 1809 ntBASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 AC093484.2-201ENST00000580996 2166 ntBASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RHBDF1Q96CC6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RHBDF1Q96CC6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms