Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2E3Q969T4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBE2E3Q969T4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2E3Q969T4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 RPS2P52-201ENST00000469610 820 ntBASIC18.94■□□□□ 0.62
UBE2E3Q969T4 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.94■□□□□ 0.62
UBE2E3Q969T4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 AL121906.2-201ENST00000621597 723 ntBASIC18.94■□□□□ 0.62
UBE2E3Q969T4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2E3Q969T4 TFP1-202ENST00000475455 1573 ntBASIC18.93■□□□□ 0.62
UBE2E3Q969T4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 AC125437.2-201ENST00000625180 2167 ntBASIC18.93■□□□□ 0.62
UBE2E3Q969T4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2E3Q969T4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBE2E3Q969T4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms