Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.01■□□□□ 0.63
LINC01555Q8NAE3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 YBX1P10-201ENST00000444752 975 ntBASIC19■□□□□ 0.63
LINC01555Q8NAE3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LINC01555Q8NAE3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01555Q8NAE3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01555Q8NAE3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 AC125437.2-201ENST00000625180 2167 ntBASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 UBE2SP1-201ENST00000450587 669 ntBASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms