Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 AC087623.3-201ENST00000607047 1098 ntBASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.11■□□□□ 0.49
PTCHD4Q6ZW05 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 AC010536.3-201ENST00000620306 533 ntBASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PTCHD4Q6ZW05 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 TERF1P5-201ENST00000477545 1207 ntBASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PTCHD4Q6ZW05 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PTCHD4Q6ZW05 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 MIR6821-201ENST00000617625 74 ntBASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
PTCHD4Q6ZW05 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms