Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.51■□□□□ 0.07
LCNL1Q6ZST4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LCNL1Q6ZST4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 UBE2SP1-201ENST00000450587 669 ntBASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 AC124016.1-201ENST00000609552 612 ntBASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCNL1Q6ZST4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 GABARAPL3-202ENST00000624044 1851 ntBASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCNL1Q6ZST4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms