Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATPAF1Q5TC12 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 GPX1P1-201ENST00000388829 606 ntBASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.06■□□□□ 0.32
ATPAF1Q5TC12 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 AC093787.1-201ENST00000450396 207 ntBASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 CYP2T3P-201ENST00000601990 817 ntBASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATPAF1Q5TC12 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 KRT18P68-201ENST00000392293 1000 ntBASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 MKRN4P-201ENST00000444706 1521 ntBASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 KRT8P36-201ENST00000489121 1440 ntBASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 AC093484.2-201ENST00000580996 2166 ntBASIC17.04■□□□□ 0.32
ATPAF1Q5TC12 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.03■□□□□ 0.32
ATPAF1Q5TC12 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms