Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.47□□□□□ -0.09
APOC4P55056 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC4P55056 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.47□□□□□ -0.09
APOC4P55056 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.47□□□□□ -0.09
APOC4P55056 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 SMG8-203ENST00000578922 2178 ntBASIC14.47□□□□□ -0.09
APOC4P55056 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOC4P55056 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.47□□□□□ -0.09
APOC4P55056 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
APOC4P55056 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.46□□□□□ -0.09
APOC4P55056 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.46□□□□□ -0.09
APOC4P55056 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.46□□□□□ -0.09
APOC4P55056 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.46□□□□□ -0.09
APOC4P55056 AF186192.3-201ENST00000583427 947 ntBASIC14.46□□□□□ -0.09
APOC4P55056 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.46□□□□□ -0.09
APOC4P55056 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
APOC4P55056 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 AC020907.5-201ENST00000624372 1936 ntBASIC14.46□□□□□ -0.09
APOC4P55056 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
APOC4P55056 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.46□□□□□ -0.1
APOC4P55056 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOC4P55056 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOC4P55056 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOC4P55056 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
APOC4P55056 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOC4P55056 AC007375.3-201ENST00000600936 2314 ntBASIC14.46□□□□□ -0.1
APOC4P55056 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
APOC4P55056 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.46□□□□□ -0.1
APOC4P55056 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
APOC4P55056 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.45□□□□□ -0.1
APOC4P55056 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.45□□□□□ -0.1
APOC4P55056 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
APOC4P55056 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.45□□□□□ -0.1
APOC4P55056 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.45□□□□□ -0.1
APOC4P55056 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.45□□□□□ -0.1
APOC4P55056 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.45□□□□□ -0.1
APOC4P55056 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
APOC4P55056 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.45□□□□□ -0.1
APOC4P55056 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.45□□□□□ -0.1
APOC4P55056 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.45□□□□□ -0.1
APOC4P55056 AC073195.1-201ENST00000607241 877 ntBASIC14.45□□□□□ -0.1
APOC4P55056 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.45□□□□□ -0.1
APOC4P55056 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.45□□□□□ -0.1
APOC4P55056 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.45□□□□□ -0.1
APOC4P55056 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.45□□□□□ -0.1
APOC4P55056 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.45□□□□□ -0.1
APOC4P55056 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
APOC4P55056 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.45□□□□□ -0.1
APOC4P55056 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.45□□□□□ -0.1
APOC4P55056 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
APOC4P55056 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
APOC4P55056 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.44□□□□□ -0.1
APOC4P55056 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 TFP1-202ENST00000475455 1573 ntBASIC14.44□□□□□ -0.1
APOC4P55056 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
APOC4P55056 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms