Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC25A1P53007 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC25A1P53007 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC25A1P53007 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC25A1P53007 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC25A1P53007 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SLC25A1P53007 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC25A1P53007 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC25A1P53007 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC25A1P53007 AC018553.1-201ENST00000616682 1458 ntBASIC17.51■□□□□ 0.39
SLC25A1P53007 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC25A1P53007 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC25A1P53007 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC25A1P53007 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC25A1P53007 GPX1P1-201ENST00000388829 606 ntBASIC17.51■□□□□ 0.39
SLC25A1P53007 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.51■□□□□ 0.39
SLC25A1P53007 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC25A1P53007 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC25A1P53007 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC25A1P53007 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC25A1P53007 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC25A1P53007 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC25A1P53007 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC25A1P53007 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC25A1P53007 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC25A1P53007 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
SLC25A1P53007 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC25A1P53007 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC25A1P53007 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC25A1P53007 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC25A1P53007 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 AL020996.1-203ENST00000536896 2307 ntBASIC17.49■□□□□ 0.39
SLC25A1P53007 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC25A1P53007 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC25A1P53007 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC25A1P53007 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC25A1P53007 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC25A1P53007 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC25A1P53007 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC25A1P53007 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLC25A1P53007 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC25A1P53007 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC25A1P53007 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC25A1P53007 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC25A1P53007 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC25A1P53007 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SLC25A1P53007 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC25A1P53007 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC25A1P53007 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC25A1P53007 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
SLC25A1P53007 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 AC004911.1-201ENST00000416316 871 ntBASIC17.48■□□□□ 0.39
SLC25A1P53007 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC25A1P53007 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC25A1P53007 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC25A1P53007 AC022517.1-201ENST00000592429 346 ntBASIC17.48■□□□□ 0.39
SLC25A1P53007 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC25A1P53007 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC25A1P53007 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLC25A1P53007 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms