Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.37■□□□□ 0.69
CAPN1P07384 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.37■□□□□ 0.69
CAPN1P07384 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.37■□□□□ 0.69
CAPN1P07384 AC006058.3-201ENST00000606217 1069 ntBASIC19.37■□□□□ 0.69
CAPN1P07384 HLA-B-256ENST00000639848 1089 ntBASIC19.37■□□□□ 0.69
CAPN1P07384 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CAPN1P07384 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CAPN1P07384 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.37■□□□□ 0.69
CAPN1P07384 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CAPN1P07384 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CAPN1P07384 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.36■□□□□ 0.69
CAPN1P07384 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CAPN1P07384 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CAPN1P07384 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CAPN1P07384 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CAPN1P07384 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CAPN1P07384 AC128676.1-201ENST00000454392 318 ntBASIC19.36■□□□□ 0.69
CAPN1P07384 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 RPS2P52-201ENST00000469610 820 ntBASIC19.36■□□□□ 0.69
CAPN1P07384 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.36■□□□□ 0.69
CAPN1P07384 AC060766.5-201ENST00000590539 871 ntBASIC19.36■□□□□ 0.69
CAPN1P07384 AC008403.3-201ENST00000598924 454 ntBASIC19.36■□□□□ 0.69
CAPN1P07384 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.36■□□□□ 0.69
CAPN1P07384 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.36■□□□□ 0.69
CAPN1P07384 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CAPN1P07384 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.36■□□□□ 0.69
CAPN1P07384 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
CAPN1P07384 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CAPN1P07384 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.35■□□□□ 0.69
CAPN1P07384 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.35■□□□□ 0.69
CAPN1P07384 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CAPN1P07384 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.35■□□□□ 0.69
CAPN1P07384 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CAPN1P07384 AP003097.1-201ENST00000530657 1135 ntBASIC19.35■□□□□ 0.69
CAPN1P07384 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CAPN1P07384 AC105020.6-201ENST00000621523 1217 ntBASIC19.35■□□□□ 0.69
CAPN1P07384 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.35■□□□□ 0.69
CAPN1P07384 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CAPN1P07384 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.35■□□□□ 0.69
CAPN1P07384 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.34■□□□□ 0.69
CAPN1P07384 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.34■□□□□ 0.69
CAPN1P07384 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.34■□□□□ 0.69
CAPN1P07384 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.34■□□□□ 0.69
CAPN1P07384 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CAPN1P07384 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.34■□□□□ 0.69
CAPN1P07384 GCSHP5-201ENST00000443090 522 ntBASIC19.34■□□□□ 0.69
CAPN1P07384 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.34■□□□□ 0.69
CAPN1P07384 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CAPN1P07384 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CAPN1P07384 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CAPN1P07384 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.33■□□□□ 0.69
CAPN1P07384 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CAPN1P07384 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CAPN1P07384 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CAPN1P07384 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms